Gene Mmc1_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1716 
Symbol 
ID4481304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2120705 
End bp2121679 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content52% 
IMG OID639722458 
Producthypothetical protein 
Protein accessionYP_865630 
Protein GI117925013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA CTCCCTATTT AAGCGAACTG GTCACCAGTA CTCTGGCAGG CCGTAGCGGG 
TCTTTGGCCG ATAACATGAC CAAAAACAAT GCGCTGCTGT TCCGTCTGCA AAAGAAAGAC
AACCTTAAAC CCTTTAGCGG TGGCCGTTCC ATCATTGAGG AGCTGGAGTA TGCAGAAAAC
AGCACCTTTC AGCGCTACAG CGGTTATGAA ACCCTAAATA TTGCGCCCAG CGAGGTGTTT
ACCGCTGCGG AGTACGATAT TAAACAGGCC GCTGTGGCCG TCTCTATCTC CGGTTTGGAG
CAGTTGCAAA ACAGCGGTAC CGAGGCGGTC ATTGAACTGA TGGAGAGCCG CCTTAAAAAC
GCAGAACGCA CCATGATTAA CAACATTGCC GCCGACCTCT ACAGCGATGG TACCGCCGAT
AGCGGCAAGC AGATTGGTGG TCTGCAACTG TTGGTGGCCG ATGACCCCAC CACGGGTACG
GTGGGGGGCA TTGATCGAGC CTCTTGGTCA TTTTGGCGCA ATGTCTCTTA TGATTGCACC
ACCGATGGTG GGGCCTCGGC CACCGGCTCC AATATTCAGC AATATATGAA TGCCGTGTGG
CTGCAATTGG TGCGTGGTAC AGACCGTCCC GACCTGATTA TTGCCGACAA TAACTTCTAT
AAGCTCTATC TGGAGTCTCT GCAAGCGGTG CAGCGTGTGG CCAGCAACGA GATGGCCGAT
GCCGGCTTTA CCAGTGTGAA GTTTATGGAT GCCGATGTGG TGTTCGATGG CGGTTATGGT
GGTAATGCCC CGGATAACCA TATGTATTTC ATCAACTCGA ACTATCTGAA ATGGCGCCCC
CATAAAGATC GCAACATGGT ACCTATTGGT CCTGAACGTT TTAGCACCAA TCAGGATGCC
ACCGTTCAAT TGATCGGTGT GGCGGGTAAC TTGTGCCTTT CTAACGCCTT TTTGCAAGGC
GTTCTCAAAG ATTAA
 
Protein sequence
MSSTPYLSEL VTSTLAGRSG SLADNMTKNN ALLFRLQKKD NLKPFSGGRS IIEELEYAEN 
STFQRYSGYE TLNIAPSEVF TAAEYDIKQA AVAVSISGLE QLQNSGTEAV IELMESRLKN
AERTMINNIA ADLYSDGTAD SGKQIGGLQL LVADDPTTGT VGGIDRASWS FWRNVSYDCT
TDGGASATGS NIQQYMNAVW LQLVRGTDRP DLIIADNNFY KLYLESLQAV QRVASNEMAD
AGFTSVKFMD ADVVFDGGYG GNAPDNHMYF INSNYLKWRP HKDRNMVPIG PERFSTNQDA
TVQLIGVAGN LCLSNAFLQG VLKD