| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1689 |
|---|
| Symbol | |
|---|
| ID | 4481709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2090878 |
|---|
| End bp | 2091486 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639722432 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865604 |
|---|
| Protein GI | 117924987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00615897 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGC AAAACGTGGA TTGGCTCTCC ATGCGTATGG CCTATGAACA GGGGGCCACG
GTACGCGAAT TGGTAAAGCA ATATGGGGGT TCCTCTTCGG CGATCTATGG GCGCATGCGT
CGAGAAGCTT GGATGAAAAC CCGCATAAAA ACTGAAGCTG GCGCTGATGT TATCACCGAA
AAGATGCCTG AAGACCCTTT GCAGGCCCTC GCGCCCAATA CAGAACACCC ATTGCTGACA
GCGCCGGCGC AGGATGAGGC CATGTTAGGC GAAAAAGGGC TTGGGTGCGA TCTGAGTGGG
GTCATTCAGG ATCATCGCGA AACGTGGCTG GAGCATAAAA AACGGATCCA CAAAGCGCTT
AATGCAGGGG ATCTAGAGCA GATCAAGCTG CTGAAACTGA GCGCGGAGGC GTTTAAAATT
TGTCAGGAAA ATGAACGTAA AGCGTGGGGC ATGGATGCCA AAGAAGGCGG GGCCGACAAG
GCTGAGTTGG CCACCGATCA ACAGTGTATG ATCACCCCAA CATTGGATGA ACTTAAAGCG
CACCTAAATG AAGAAAGATC TGCAATGGAA GCCCCAGAAA GGGCCTCAAC TCACCGCCAT
AGCCAGTAG
|
|---|
| Protein sequence | MAEQNVDWLS MRMAYEQGAT VRELVKQYGG SSSAIYGRMR REAWMKTRIK TEAGADVITE
KMPEDPLQAL APNTEHPLLT APAQDEAMLG EKGLGCDLSG VIQDHRETWL EHKKRIHKAL
NAGDLEQIKL LKLSAEAFKI CQENERKAWG MDAKEGGADK AELATDQQCM ITPTLDELKA
HLNEERSAME APERASTHRH SQ
|
|---|
| |