| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1654 |
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| Symbol | |
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| ID | 4484031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2055203 |
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| End bp | 2057716 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639722397 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_865569 |
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| Protein GI | 117924952 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00856937 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.28263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGT GTTTTTTGGT CAACTCCAAC GATACGGCAC AATCACAGCC TGCGGATTTG
GATACCCCAG CCACAGAAGC CTCTTTGTAT GCCCAATGCT ACCAAAACCT GTTGAACGTA
GGCCAGCAGG GGCTCTGCCT GTTGGGGCGG GATCGTCTGA TCGTGCATAC CAATAAAACC
ATGGCGGATT GGTTGCGGGT AAGCCCCGAG GCGTTGTACC AAACCCCCTT TAGCCAGTGG
GTTGACCTAA ACGACCGAGA AAAACTCGAA GCCTTTTTTA TTGATGTAGA CCAAGATGGA
CCGAGCGCCA TAACCCTTAA TTTGGTGCCA GACCTGGGTC GTAATGGGCG TTCCGTGCGG
GTGATGGGCG CGGGCTTGAG CGATGTGGGC GGTGTGGCCG GTATGGGGCT GGCTTTGGTG
GATCTATCCG ACCAACGGGC CATGCTGCAA CAGCTTAACC ATGAGCTCAC CACCTACCGC
AATATCGCTA ATTTTACCCA TGACTGGGAG TCTTGGTTTG ATGCCCAAGG GCGGGTGCAA
TGGATTAACC CCGCAGTGCA ACGGGTAACA GGGTATAGTA TCGCCGCATG TATGGAGATG
GCAACCTACC CTGTGGACCT GTTCCATGCC CAAGACCGCT CGACCCTGGA GCGGCTTATG
CAGGAAGGAC GCGCTGGAGC GGTGGCCCAT GATGTCTCCT TGCGGATTAA ACATCGTGAA
GGGGATCTGC GCTGGGTCTC GCTGAGTTTG CAACCTATGC TCACCAACGC CGGTGAAAAA
CTGGGCTTTC GCACCAGTAT TCGAGATATT TCAGAACGGC GCGAAGCCGA GCAGGCATTA
GAGGCAGCGA AACGTTCCGC CGAAACCGCC AGTAAAGCCA AAAGCCGCTT TCTCTCCACC
ATGAGTCATG AAATTCGTAC CCCGATGACC GCCATTTTGG GGGTTGCCGA ATTGATGTCG
GGAACCCATT TAGACCGGGT TCAACGGGAG CATGTGAGCA TTATCCGGCG CTCTGGGGAT
GCCCTGTTGG AGCTGATTGA CGATATTTTG GTGATCAGCC AAAACGAAGG CGCCCAAGAG
GGGGAAAAAC AGGTGGTGTT TGATGTGGAC CACCTGTTGG AATCGGTGAT GGATATGGCC
AGTTATCGCG CCACCGAAAA GGGAATTAAA CTGCTCTCAC ATGTCGCCGC TTTGGTCCCG
GTGCGGGTGA TGGGCGATCC AGTACGGCTG CGGCAAGTAC TTATAAACCT TGTGGGTAAT
GCCATAAAAT TTAGTGAAAA GGGGGAGGTG GTTATCCAAG TGCGGCCTGG GCCGCGCAAC
GGCCCTGAAC GCTCGGATTA CCGGTTTAGT GTGTCGGATA ATGGTATTGG CATCCCCATG
GAAAAGCGTG AGGCGATCTT TGATGCCTTT AGCCAAGTGG ACGAAACAGA AAGCCGTCGC
TTTGGGGGTA CCGGGCTGGG GCTGACCATC TGTCGCCGCT TGGTCAACCT TATGGGTGGA
CAGCTCGAGT TGCTCTTTAG TGAACCTGGG GTGGGTTCAA CCTTTGCTTT TGATATCCCT
TTACAACCCG CCATGGAACA GGCCAATCCC GCCAACTTGG AGTATGATCA TACCACTCTG
AAAGAGCGCC GCGTGGTGGT GTTCAGCCGA GGCAAAAACC TGCGCACCAT GGTGCAGGAG
ATGCTCACGC CTGAAGGGGT TCACTGTACC GCCGTCAGTA ACCATGATGA GCTGGTGCAA
TTGATGGAGG TGGTTCACGA TGTGGAGCGG GATGGGCAGG GACCCCTGTG CGATATGCTG
CTGTTGGATG CCGAAAAACC CTTCGCCAAT ATGGATGTGG TAAGCTACGC AAGCGAGCTG
AAAAAGCGCA AGATATTTCG AAACTTACAT TTTGTAATCC TAGGGTTGGA CCCCGGACAA
AAAGAGCGTT TTGCGCTGTG TCAGGCGGGC ATCAACTATG TGTCGCCCCC GCTGAAGCGC
CGTGTTATCT TAAAAACCTT GGCCGAACTG TTTGTCGAAC CTGGCTATCG GCACTTGGAT
GACGCCTGTC GCAATTTAAT GCACGCTACC CACAAGCGTG AACTTAAAGA GGGGGGGGCT
CTGCGTATTC TACTGGCTGA GGATGACCCC GATAGCAGCT ATGTTATCCA AAATTTTCTT
AAAGATACCC TCTGCCACCT GGAGGTGGTG ACCGATGGAC AGCAGGCTCT GCAACGGTTT
CAAGAGGGGA TGACCGATCC TTTGGGTGCC GCTATGGAGT TTGACCTCGT TATTATGGAT
ACCCAAATGC CGGTGATGGA TGGTTATACG GCGGTGCATC GCATCCGTAG TTGGGAACGC
ATACAGCAGC GCGCCCCTGT AAAAATTTTA GCCATCTCAG CCCATAGCGG GCAGGAGGGG
CGTTTGACCA GTCTGCGCAA TGGCTGCGAC GACCATTTGA ATAAGCCCCT GACCCAGCGG
GATCTGCTCG CCCACATTGA CGCACTGTGT CACCGTCTGC CAAAAACAGG CTAA
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| Protein sequence | MKRCFLVNSN DTAQSQPADL DTPATEASLY AQCYQNLLNV GQQGLCLLGR DRLIVHTNKT
MADWLRVSPE ALYQTPFSQW VDLNDREKLE AFFIDVDQDG PSAITLNLVP DLGRNGRSVR
VMGAGLSDVG GVAGMGLALV DLSDQRAMLQ QLNHELTTYR NIANFTHDWE SWFDAQGRVQ
WINPAVQRVT GYSIAACMEM ATYPVDLFHA QDRSTLERLM QEGRAGAVAH DVSLRIKHRE
GDLRWVSLSL QPMLTNAGEK LGFRTSIRDI SERREAEQAL EAAKRSAETA SKAKSRFLST
MSHEIRTPMT AILGVAELMS GTHLDRVQRE HVSIIRRSGD ALLELIDDIL VISQNEGAQE
GEKQVVFDVD HLLESVMDMA SYRATEKGIK LLSHVAALVP VRVMGDPVRL RQVLINLVGN
AIKFSEKGEV VIQVRPGPRN GPERSDYRFS VSDNGIGIPM EKREAIFDAF SQVDETESRR
FGGTGLGLTI CRRLVNLMGG QLELLFSEPG VGSTFAFDIP LQPAMEQANP ANLEYDHTTL
KERRVVVFSR GKNLRTMVQE MLTPEGVHCT AVSNHDELVQ LMEVVHDVER DGQGPLCDML
LLDAEKPFAN MDVVSYASEL KKRKIFRNLH FVILGLDPGQ KERFALCQAG INYVSPPLKR
RVILKTLAEL FVEPGYRHLD DACRNLMHAT HKRELKEGGA LRILLAEDDP DSSYVIQNFL
KDTLCHLEVV TDGQQALQRF QEGMTDPLGA AMEFDLVIMD TQMPVMDGYT AVHRIRSWER
IQQRAPVKIL AISAHSGQEG RLTSLRNGCD DHLNKPLTQR DLLAHIDALC HRLPKTG
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