Gene Mmc1_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1588 
Symbol 
ID4482013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1960255 
End bp1960713 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content54% 
IMG OID639722330 
Productperiplasmic nitrate reductase subunit NapB 
Protein accessionYP_865503 
Protein GI117924886 
COG category[C] Energy production and conversion 
COG ID[COG3043] Nitrate reductase cytochrome c-type subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.984752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTT TCGCGAGATG GATGGTAATG GGATGGATGG CCTGCTTCGC ACTGCTGGGC 
GTGGTCTCCA CGGCATCGGC TAATGAAGGC GGCGTGCAGT CCCTACGGGG CGTGCACGGT
TTGGATAGCA ACGCCTCGGA ACCCGATTTT AAAAAATGGA ATGAGGACCA AAAACCGATC
AAACGGGACT ATCTTCAGCA ACCGCCGTTG ATCCCCCACT CCGTAGAGCA ATACCGCATC
AATTTGCGCC AGAACCGCTG TTTAAGCTGC CATAGTTGGG AGACCTACAA ACAGTCTGGG
GCAACCAAGA TCAGCTTAAC CCACTTCCGG GATCGTTATG GCAGTGAGTT GGCGGATGTC
TCACCCGGAC GCTACTTCTG CACCCAGTGT CATGTGCCCC AGCGCAACGC ACAACCCTTG
GTGGAAAATA CGTTTAAACC GGTGGATGCA CTGCGCTAA
 
Protein sequence
MNSFARWMVM GWMACFALLG VVSTASANEG GVQSLRGVHG LDSNASEPDF KKWNEDQKPI 
KRDYLQQPPL IPHSVEQYRI NLRQNRCLSC HSWETYKQSG ATKISLTHFR DRYGSELADV
SPGRYFCTQC HVPQRNAQPL VENTFKPVDA LR