Gene Mmc1_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1549 
Symbol 
ID4483145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1909296 
End bp1910060 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content54% 
IMG OID639722291 
Productglycosyl transferase family protein 
Protein accessionYP_865464 
Protein GI117924847 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCA AGCTGCCCAT AAGTGGGGTG ATTATCACCC TCAACGCCGC CCATCAACTG 
GAAGAGTGCC TGCAATCGCT GGCCTTGTGC GCGGAGATTG TGGTGGTGGA TTCCGGCTCC
AGCGATGGCA CTCAAGCGCT AGCGGCCCGC TATGGCGCAC GGATTATTGA GCAGCCGTGG
CTCGGCTTTG GCCCACAAAA ACAGTTTGCC ACCCAACAAG CCAGCTACCC CTGGGTACTC
TGTTTGGATG CCGACGAACG CCTCTCAGCC CCTTTACAAC AGAGCATCGT AGAGCTTTTT
AGCACACAGC CCCCCGCGCA ACATGCCTAT CAGATGCCCC GCTGCAACCG CTTTATGGGC
CGCTGGTTGC GCCATGGTGA GGGCTACCCA GACCCCAATT TACGCCTGTT TCATCGGGAT
TATGCCCATT GGAGCCAAGA CCCCGTGCAT GAGCATGTGG TGGCCCTTGG TGCTGTAGGC
AACTTGGCGG GGGATATTTT GCACCACTCA GAAGAGGGGT TGGAGTGCTA TCTGAACAAA
CAAAACCGCT ATACCAGCCT GCAAGCTGAA AAGCTGGCTC AAGGTAAGGC AATTTCACCC
CACAAAATTT ACCTAAGCCC CCTGTTTCGT TTTATAAAAT TCTACCTGCT ACGACGGGGG
TTTTTGGACG GCCTACCCGG TCTATTGCAC ATCCTTATTG GCTGTTTTAA CAGCATGATT
AAATATGCCA AGGCTTACCA TCATCAGCAA AACCCGACGC ATTGA
 
Protein sequence
MSPKLPISGV IITLNAAHQL EECLQSLALC AEIVVVDSGS SDGTQALAAR YGARIIEQPW 
LGFGPQKQFA TQQASYPWVL CLDADERLSA PLQQSIVELF STQPPAQHAY QMPRCNRFMG
RWLRHGEGYP DPNLRLFHRD YAHWSQDPVH EHVVALGAVG NLAGDILHHS EEGLECYLNK
QNRYTSLQAE KLAQGKAISP HKIYLSPLFR FIKFYLLRRG FLDGLPGLLH ILIGCFNSMI
KYAKAYHHQQ NPTH