| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1385 |
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| Symbol | |
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| ID | 4481804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1679793 |
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| End bp | 1684106 |
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| Gene Length | 4314 bp |
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| Protein Length | 1437 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639722128 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_865302 |
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| Protein GI | 117924685 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.793645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACC ATCCCCCGCA TCTTCGACTG CTTAGCCATA ACAAAGGGCG GGTTGACGCC
ACACCCCATG AGCAGCAGCG GGTGCGTATT GGCGACCGCG CCTTAAACTT GCACGCCATT
GAGGCGTTAG AACCCCTAGC GGGCGTGGCG CAACTGCTCT GGCAACAACC CTTTTTACAT
ACCGAAACGT TTGATCGGCT GCTAACCTGG ATGGCGCGTG AGGATGCCAT CTCTTTGCAG
GTGGTGGTGG GCGAGCCATT GGCGGGCAAA AGCCGTATGG CAGCAGAGCT ATGCAAACGG
GTCTCTGATC AATGGTGTTG CGGTTTTTGG CAGAGTGACG GCGGGCAAAA GGGTAAGGAC
CGTCCTCTCT CGGTGCAGAT GGATCGTCCC ACCTTAATTG TGGTGGATGA GGCCCCCGAA
CAGGCTGAGG CGTTGGGGGG GTGGCTCTGT GCGTTGGCTC GCCATCCCGA TCAGGTGCCC
CACCGGTTGC GGGTACTGTT TTTGGCTGAC CATGGAGACC CTACCTGGGG TTGGTGGCGA
GATCTGCTAG AGAGCGCGGG TCGGGCCCGC CTGCATTTAA GCCAGTTTTT CGACTACAGC
CATGGCGCCA CGTTGACGTC GTTTTTGGCA AAACCATCGC ATCGTTTTCA GTTTTTAAAA
TCTTTGCTTG CCCACTATAA CCCCAACCTC TCTTTGGGCA GTTACCGTAC CGGCTTACCC
TGGATTAACG CCCTGGCGCA TCGGGATTGG TGCGAAGACC CCCTCTACCT GTGGATGGTG
GCGTTTGTGG TGGCGCACAC ACCCAACAAC GATGATACCT TGTTGGAAAC GCTGTTGGCA
CCGGAACCCC TTGCAGTTGA GCGCGCCATG GGGGCGATGC TGGGCTTGCA GGTGCAGCGC
CAGATGGAGG GTGAATGGGC AACGGCACTG CTGCCTATGG TGCTGTTTAA TACCCTCTGC
CATGGGTTAG ATGCCCAAAC CCTGAGCCAG CAAATGGCAC CTTTGGCGTT AGATCTGGGG
GTGGATGGGG ATCGCTTGCG CATGCTGGCG CAACGCCTGC GCTACGGTGT GCAGGACTAT
TACGCTTGGC CGATTGCCGG GGATGGCGGC ATCCCCCCGC TGGGGCCAGA GCCGCTGGCG
GTCGCTTTTA TTAGCACCCA TTTGTTGGAA CTTCCCCTCC CGTTGCAGCA GCAACTGCTT
GTGGCCACCA CGGCGGTTGG AGGCAAATGG CCGTTGTTGC AGTTGATCCA TTGTCTGCAT
GGCGAGAGTG ACGATCATCG TTTTAACCAA TTGGTGCAGC GTATTGAAGA GCGGATCTTG
GATGACCGCC TGCCCCTGAA TGATTTGATG GATTTGGTCG ATAGTATGCC CTCGGGTTTT
GGCCCGGTTA GTGAGTTGGA GCAGACCATC CTAAACCATT TGGTCGAACG GTTGGATGCA
GTGGTGCAGG GGGTGGTAAG CCATGCCTAT TATCCGGCCC TGGGCCACTA TTGCAACATG
CTCTCCTACG TGCTCAGCTA TCTGCAACGG TTTGAGCAAG CCCTTACATT TGCCCAGCGT
TCGGTGCATA TCTTTGAGGC TCTGGTGGAG GAGGCGGCAG ATATTTTTGA ACCCGACCTC
GCCGACGCTT TAAGCTCTTG TGGTTTACGG TTGGAGGAGT TGGAGCAGAT AGAACAAGCG
GTGGAGATGA AGGAGCAGGC CCGCTTGCTG TTTGAATCGT TAGCCCTTCG TGATGCCGAG
ACGTTTACCG CCAGTTGGGC GCGCGCCCTC AACAGTTTGG GGGTGAGCCT GGGGACGCTG
CAAGACCATA GTGGGGCGAT TCAAAGCTGC ACCCAATCCC TTTCTCTGTT TGAGCGGCTG
GCGAAAATTC ATCCCCGGCA GTTTGCGGGT GACTATGCCG CGGCGCTGAA TAATACCAGC
AATGTGCTCA AAGAGGCCGG TCAGTTAAAA GAGGCTTTGC AGTGGGTGAG TAAGGCGGCG
GATGTGTTTG ATGGTCTCTA TAAGCGCGAC CCTCAGCTCC ATGGTGCCAA TGTGGTTAAA
GCCCACAGTA ACCGTACTTT CTTGCTGGCT GAGTTGGGCC ATGATGATGA AGCTTTGGCC
GAAGGCAACC GCGCCCTCAC CCTTACCCGT GAGATGATGG AACGGGAGCC AGAGCTGTAT
CGTCCGTTTA TGGCCGAGCT GTGTGAACAG TTTAGTAAGC CACTCCAGCG ACTTGGCCAG
CATGAACTCA GTAGTACGTT GTTACAGGAG GCGGTGAGCC TCTACCGGGA ATTGGCCGCC
CAAGAGCCCC TTTACTATGA AGAGCGCTTA GCCGCTGCGA TTTATCAATT GGCAGACAGC
AATTTTGAGC GGGGTGATCA AACCCTGGCG TTGCAAAGCG TCAGCGAGGC GGTGGCGCTG
TTTGAGCGAT TGGCCCAACG GCAACCCCGA GAGTTTAACC CCTTATTGGT TATGGCGTTG
CATAATCAAA GTGTGGGGTT GGCCAATCAG GGGCAGATTC ACCAAGCGAT TCGTGCTATG
CGGCGCACGG TGGGTCTGTA TGGGGTGTTG GAGTTGGGGG ATGAAGAGTA TCTTCCCGCG
CATGTGCAGG CGTTGGATAG CCTAGGCCTG TTTTTGCGGG ATGCTGGTCG AAGCCGTGAG
GCGGCCAAAG TGTGTGGCGA GGCGATGGTA CAGCTCCTCT CCGGTTATGC CCAATTACAA
GAGCAGGAGC TCGATCGCAT CGCTCCCCAA GTGTGTCGTA ACCGCTGGCT GCTGTGTCAG
GAAGTGGGCA ACCGGGCGGG CGCACTGGAA GCACTGCAAA ATTTGCGTGA TATCCTGATG
CGGCAAGTGG TGCGCAACCA AGAGGTTGAT GATGCCGCTG CGCTGCTGGA GAGCTGGGAG
GCCCAGATTA AAAGCCTCGT CGAGGATAAC CGCATGGAGC AGGCTGAGCA GCTGGTAACC
CAGGGGCAGA TGTGGTTTGC GGCCCAACAG CAGCAGCCCG GTGCGGTTAA GTTAAGGTCG
TTGTGGGTGA TCGCGCTGGG GCGTATGGCG CTTATTCGAG CGCAGCTCTT GGTGGCAGGC
GGGGCCAAAG ACGAGGCTAT GGCCTCTGCG GCATTGGGGC TGCAACTTAT TGATGGGCTG
TATGAGAGCG ACCATATGGC GTTTGGTGCC AATATGGGCC AGGGCTACTG CGAGGCTTCG
GATTGTGCCC GTCATTTGGA TTTGCCCCAG CAGGCCCTGA GCTACCGGCA GGCTGCGGTT
AAGGTATTTG AAAAGCTGGT CTTGGCGGGT CAGCAACACT TTATGCCCAC TTTAGCCACC
GAACGGCTCA ATGTGGCAAC CTTGCTGGGG CGTGAGGATG AGCGTCTGGA AGAGGCTTGT
GGTGAATTAA CAAAAACGCT ACTGCTGTGG CCCCAGTGTG CGGGGCAGCA GCCCCAAACG
CTGGAGCCCC TATGGGTGCG CACCTTGGAG CTGTTGGCGA TGGTGCAGCA TCGCTTGGGG
GATCATGCGG GGCGTTATGA GACCCTGACT GAGCTGGTTG AACAGTTGCA AAAGATGCAA
TATGTGGAAA ATCATCAACA ACTTTCGGCC CGTATGACGC TGGCGGAGTG TCTGCTTGAG
CGTTTTGAAA GCCAGCCCGA GTTGGATGCC GCGCAGCGTT TGGGGGCGTT GCAGAGGGTG
CTCTCCCCCT TACAGGGGCG CACGGTAGAG CCCCACGGGG TAAAATTGGG GGAACTGCTG
GCGCGGATGG CCGAAATGGC CTTTGAGGTG GATGATTTTA AACAGAGCGA AAGTTTGGCG
CTCTGGGGAG AATCGCTGTT TCAAGGGCAT GTGGAGCCTT TGTTGGAGCT GCGCCTGTAT
GTGCGACGGG CCCGTAATTT TCAGCGGTTG GCCCAATATC TGGTGCAGGA AAAGCAGTAT
AGTCGGGCAC TAAACATGGC CCAAAAAGCG GTGGAGATCT GCGTGCCACT GCTTAAACAG
GAGGGCGATT TACAGGTGAT ACGCCCCTTT GTGGCGGTTA ACCATCACCA GTATGCGGTG
TGTCTGATGT TGGTCGGCCA ATATGGTGCG GTTGAACCCA TAGCCAAACA GGCGCTTATG
CTTATGTATG AAGCCTTTCT GGAGCAGCCA GAGAGCCTGC ACCAAGGTCT GCTTAGCCTG
CTGCACAGCT ATGAAAATCT GCTGCTGCGC AGTCAGGGGA TGCCCCTGGA AAAAGTGCGC
AGTCAAACTT GGATTTTGCC GGTTTATGCG GCCTTAGAGC AGCATAAACC CCGGCCTTCC
TCCTGGGCTA AACGGATGTG GCAGCGCCTG TTTGGGCGTT TTAGCCATCC ATAA
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| Protein sequence | MPNHPPHLRL LSHNKGRVDA TPHEQQRVRI GDRALNLHAI EALEPLAGVA QLLWQQPFLH
TETFDRLLTW MAREDAISLQ VVVGEPLAGK SRMAAELCKR VSDQWCCGFW QSDGGQKGKD
RPLSVQMDRP TLIVVDEAPE QAEALGGWLC ALARHPDQVP HRLRVLFLAD HGDPTWGWWR
DLLESAGRAR LHLSQFFDYS HGATLTSFLA KPSHRFQFLK SLLAHYNPNL SLGSYRTGLP
WINALAHRDW CEDPLYLWMV AFVVAHTPNN DDTLLETLLA PEPLAVERAM GAMLGLQVQR
QMEGEWATAL LPMVLFNTLC HGLDAQTLSQ QMAPLALDLG VDGDRLRMLA QRLRYGVQDY
YAWPIAGDGG IPPLGPEPLA VAFISTHLLE LPLPLQQQLL VATTAVGGKW PLLQLIHCLH
GESDDHRFNQ LVQRIEERIL DDRLPLNDLM DLVDSMPSGF GPVSELEQTI LNHLVERLDA
VVQGVVSHAY YPALGHYCNM LSYVLSYLQR FEQALTFAQR SVHIFEALVE EAADIFEPDL
ADALSSCGLR LEELEQIEQA VEMKEQARLL FESLALRDAE TFTASWARAL NSLGVSLGTL
QDHSGAIQSC TQSLSLFERL AKIHPRQFAG DYAAALNNTS NVLKEAGQLK EALQWVSKAA
DVFDGLYKRD PQLHGANVVK AHSNRTFLLA ELGHDDEALA EGNRALTLTR EMMEREPELY
RPFMAELCEQ FSKPLQRLGQ HELSSTLLQE AVSLYRELAA QEPLYYEERL AAAIYQLADS
NFERGDQTLA LQSVSEAVAL FERLAQRQPR EFNPLLVMAL HNQSVGLANQ GQIHQAIRAM
RRTVGLYGVL ELGDEEYLPA HVQALDSLGL FLRDAGRSRE AAKVCGEAMV QLLSGYAQLQ
EQELDRIAPQ VCRNRWLLCQ EVGNRAGALE ALQNLRDILM RQVVRNQEVD DAAALLESWE
AQIKSLVEDN RMEQAEQLVT QGQMWFAAQQ QQPGAVKLRS LWVIALGRMA LIRAQLLVAG
GAKDEAMASA ALGLQLIDGL YESDHMAFGA NMGQGYCEAS DCARHLDLPQ QALSYRQAAV
KVFEKLVLAG QQHFMPTLAT ERLNVATLLG REDERLEEAC GELTKTLLLW PQCAGQQPQT
LEPLWVRTLE LLAMVQHRLG DHAGRYETLT ELVEQLQKMQ YVENHQQLSA RMTLAECLLE
RFESQPELDA AQRLGALQRV LSPLQGRTVE PHGVKLGELL ARMAEMAFEV DDFKQSESLA
LWGESLFQGH VEPLLELRLY VRRARNFQRL AQYLVQEKQY SRALNMAQKA VEICVPLLKQ
EGDLQVIRPF VAVNHHQYAV CLMLVGQYGA VEPIAKQALM LMYEAFLEQP ESLHQGLLSL
LHSYENLLLR SQGMPLEKVR SQTWILPVYA ALEQHKPRPS SWAKRMWQRL FGRFSHP
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