Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1325 |
Symbol | |
ID | 4483795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1612165 |
End bp | 1613649 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639722068 |
Product | lambda family phage portal protein |
Protein accession | YP_865242 |
Protein GI | 117924625 |
COG category | [R] General function prediction only |
COG ID | [COG5511] Bacteriophage capsid protein |
TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0443471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGT TTAAGCGTCT GTTTGGTGGT CCTCCCAAAC GCCGGGCAGG ATATGAAGGG GCCGCATCTG GTCGGCGGCT GGGTAACTGG CAGCCGGAAG AGGCCGGGAT CAATGCCCTG CTGTTTCGCG ATGCCACCCT CATGCGTGCA CGCTCACGAG ACTTGGTGCG CCGTAATGCC TGGGCATCCA ACGCTGTAGA CTCTCTGGTT GGGAACCTTG TGGGTACCGG TATCAAGCCC CAATCCACGG TAAAAGACCC CCAGATCAAA GCCCAGATTC AGTCTTTATG GCTGGCCTGG ACAAAAGAGG CCGATGCCCA CGGCATGCTG GGCTTCTATG GCCTTCAGGC TTTGATTGCC CGCGCTATGA TCGAGGGGGG CGAGGTGCTG GTACGGCTGC GCAATCGGGA TGCCCGTGAT GGCTTGTTAG TCCCCCTTCA ACTCCAGGTA TTGGAGCCCG AACATCTCCC TGCCAGTGAC AGCCGGGATC TACCCAACGG GCATCGGGTA AGGGCTGGGA TTGAGTTTGA CAAGATCGGT CGCCGGGTCG CCTACCATCT GTTTCGGGAA CACCCCGGTG AACAGCCCAT GCTGTTCAAA GCGGGGGATG TAGTCCGGGT GCCAGGCTCA GAAGTGTGTC ACATTTTCAA ACCTCTGCGC CCCGGTCAGC TAAGAGGAGA ACCCTGGATG GCTCAGGCGT TGGTCCGCCT CCATGAGTTG GATCAGTACG ACGATGCGGA GCTGGTGCGG AAAAAGACCG CCGCGCTCAT CGCCGGCTTC ATCACCAAAC CTGACCCCGA GTTGGGCGTT GGCGGTGAGG ATGGACAGGA CCCGGATGAA CAGGGGGCCG TCCCCGTCAC CTGGGCTCCC GGCACCATGC AGGTCCTGCT ACCCGGTGAG GATGTAAAGT TTTCCGATCC GGCAGACGTG GGCGGTCAAT ACGGGGAGTT CATGCGCACC CAACTCCGCG CTGTGGCTGT AGGGCTTGGG CTGACTTATG AGCAACTCAC CGGCGACCTC ACTGGGGTGA ACTACTCCTC CATCCGTGCT GGCATGGTGG AGTTTCGCCG CCGCATGGAA CAGATCCAGC GCATGGTCTT GATCCATCAG CTTTGCCGCC CTGTATGGGA ACGGTGGATG GATCAGGCTG TTTTGTCGGG TGCTTTGCAG CTTCCCGAGT ACAGCAAACG CCGCCGTGAA TATCTGGCGG TGAAGTGGAT ACCTCAAGGG TGGACCTGGG TGGATCCACA AAAAGAGATG AACTCCATCA TCTGGGCGAT CCGGGCTGGT CTGCTCAGTC GGGCTGAAGC AGTCTCTACC TACGGCTATG ACATCGAAGA GATCGACCGG GAGATCGTAG CCGATAACAA GCGTGCCGAT GAACTGGGGC TTGTGTTTGA CTCTGACTCA CGGCGTACTT CCCGGTCGGG AGTTTCGCGG GACAGCAAGC AGAGTGATAC AGAGCTTGTG GATCTGAATG CATAA
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Protein sequence | MKLFKRLFGG PPKRRAGYEG AASGRRLGNW QPEEAGINAL LFRDATLMRA RSRDLVRRNA WASNAVDSLV GNLVGTGIKP QSTVKDPQIK AQIQSLWLAW TKEADAHGML GFYGLQALIA RAMIEGGEVL VRLRNRDARD GLLVPLQLQV LEPEHLPASD SRDLPNGHRV RAGIEFDKIG RRVAYHLFRE HPGEQPMLFK AGDVVRVPGS EVCHIFKPLR PGQLRGEPWM AQALVRLHEL DQYDDAELVR KKTAALIAGF ITKPDPELGV GGEDGQDPDE QGAVPVTWAP GTMQVLLPGE DVKFSDPADV GGQYGEFMRT QLRAVAVGLG LTYEQLTGDL TGVNYSSIRA GMVEFRRRME QIQRMVLIHQ LCRPVWERWM DQAVLSGALQ LPEYSKRRRE YLAVKWIPQG WTWVDPQKEM NSIIWAIRAG LLSRAEAVST YGYDIEEIDR EIVADNKRAD ELGLVFDSDS RRTSRSGVSR DSKQSDTELV DLNA
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