| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1307 |
|---|
| Symbol | |
|---|
| ID | 4482663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1600465 |
|---|
| End bp | 1600863 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639722050 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865224 |
|---|
| Protein GI | 117924607 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.478307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.112678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAGC AGAAATGGGA TGCTCCAGCT GTAGCAAAAC GGTTAGAAGA GGCAGCCAGC
ACCATGAAGC GGTTGCCAGA GGATGGAGTG CGCCCCCGTG GGCATAGCTC CTCTTGGCCC
CCCTTCTTGC GGGAGTATTG GGAAAGCTAT GGCATGCAGA ACGTCCGGGT GCGCCTGGGG
CCGCCTACCC CGGATGCCAT TGACCGCATG GATGAAGCTT TGTCGTGGTT GCACACTCTG
GAGCCAGATC AGGCAAAGTT GGTGTGGCTT CGTGCTGAAA AGGTGCCGTG GAAGTTCATC
ATGGCCCAAC TCGGTGTCTG CAGGGAGACT GCCCGCCAGC GCTACCTGAT CGCCATGGCC
ACTCTTTCAG CCAAACTCAA TCAACAAAAA AATGCCTAG
|
|---|
| Protein sequence | MREQKWDAPA VAKRLEEAAS TMKRLPEDGV RPRGHSSSWP PFLREYWESY GMQNVRVRLG
PPTPDAIDRM DEALSWLHTL EPDQAKLVWL RAEKVPWKFI MAQLGVCRET ARQRYLIAMA
TLSAKLNQQK NA
|
|---|
| |