| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1260 |
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| Symbol | |
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| ID | 4481855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1552392 |
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| End bp | 1553876 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639722003 |
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| Product | lambda family phage portal protein |
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| Protein accession | YP_865177 |
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| Protein GI | 117924560 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.233971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC TTAAGCGCCT GTTTAGAGGT CCTCCCAAAC GCCGGGCAGG ATATGAGGGT
GCAGCATCTG GTCGGCGACT GGGCAATTGG CAGCCCGAAG AGTCTGGGGT CAATGCCCTG
CTGTTTCGGG ATGCGACGCT CATGCGCTCC CGGTCACGGG ATCTTATTCG CCGTAATGCC
TGGGCGGCCA ATGCGGTGGA CTCCCTGGTG GGGAACCTGG TGGGCACCGG TATCAAGCCC
CAATCCACGG TAGAAAATCC TCAGATTAAA GCGCAGATCC AAGCATTATG GCTCGCCTGG
ACCCGTGAGG CTGATGCCCA CGGCATGCTG GGCTTTTATG GCCTCCAGGC TTTGATTGCC
CGCGCTATGA TCGAGGGGGG CGAGGTGCTG GTACGGCTGC GCAATCGGGA TGCCCGCGAT
GGCCTCATTG TACCACTACA GTTGCAACTC TTGGAACCAG AGCATCTCCC CGCCAGCGAT
AGCCGGGATC TACCCAATGG TCACCGGGTA AGGGCTGGGA TCGAATTCGA CAAGATCGGT
CGCCGGGTCG CTTACCACCT GTTTCGGGAA CACCCCGGTG AGCAGCCCAT GCTGTTCAAA
GCGGGAGATG TGGCCCGCGT GCCTAGCTCA GAGGTGTGTC ACATTTTCAA ACCTCTGCGC
CCCGGTCAGC TAAGAGGAGA ACCCTGGATG GCTCAGGCGC TGGTTCGCCT CCATGAGTTG
GATCAGTACG ACGATGCGGA GCTGGTGCGG AAAAAGACCG CCGCGCTCAT CGCCGGCTTC
ATCACCAAAC CTGACCCCGA GTTGGGCGTT GGCGGTGAGG ATGGTCAGGA TCCTGATGAA
CAGGGGGCCG TCCCCGTCAC CTGGGCTCCC GGTACCATGC AGGTACTCTT GCCTGGTGAG
GATGTAAAGT TCTCTGACCC AGCCGATGTG GGTGGTCAGT ATGGAGAGTT TATGCGCACC
CAACTGCGCG CTGTAGCTGT GGGGCTGGGT CTGACCTATG AACAGCTCAC CGGGGATCTC
AGTGGGGTCA ACTACAGCAG TATTCGCGCC GGTATGGTGG AATTTCGCCG CCGAATGGAG
CAGATCCAGC GCATGGTATT GATCCATCAG TTTTGCCGTC CCGTATGGGA GCGGTGGATG
GATCAGGCGG TGCTCTCCGG TGCTCTTCAG CTTCCCGACT ATCCAAATCG CCGTCGTGAA
TATCAGGCAG TGAAATGGAT TCCCCAAGGG TGGCAGTGGG TGGATCCTCA GAAAGAGTTC
AATGCCATCA TCTGGGCCAT CCGCGCTGGT CTGCTCAGCC GGGCCGAAGC GGTCTCCACC
TACGGCTATG ACATTGAGGA GATCGACCGG GAGATCGCTG CAGATAACCA ACGGGCCGAT
GATCTCGGTC TGGTCTTTGA CTCCGATGCC CGTCGCACCT CCCGTTCTGG GGTATCCCGC
GACTCTGGGC AATCTGACCC TGAACTGGTC AATTTAGAAG AGTAA
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| Protein sequence | MKLLKRLFRG PPKRRAGYEG AASGRRLGNW QPEESGVNAL LFRDATLMRS RSRDLIRRNA
WAANAVDSLV GNLVGTGIKP QSTVENPQIK AQIQALWLAW TREADAHGML GFYGLQALIA
RAMIEGGEVL VRLRNRDARD GLIVPLQLQL LEPEHLPASD SRDLPNGHRV RAGIEFDKIG
RRVAYHLFRE HPGEQPMLFK AGDVARVPSS EVCHIFKPLR PGQLRGEPWM AQALVRLHEL
DQYDDAELVR KKTAALIAGF ITKPDPELGV GGEDGQDPDE QGAVPVTWAP GTMQVLLPGE
DVKFSDPADV GGQYGEFMRT QLRAVAVGLG LTYEQLTGDL SGVNYSSIRA GMVEFRRRME
QIQRMVLIHQ FCRPVWERWM DQAVLSGALQ LPDYPNRRRE YQAVKWIPQG WQWVDPQKEF
NAIIWAIRAG LLSRAEAVST YGYDIEEIDR EIAADNQRAD DLGLVFDSDA RRTSRSGVSR
DSGQSDPELV NLEE
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