| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1180 |
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| Symbol | |
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| ID | 4482442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1479513 |
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| End bp | 1480370 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639721923 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_865097 |
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| Protein GI | 117924480 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.451315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00501753 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGTCG TACGCAGCAT TATGATGGTC GCGGGGGACA AACCCCGCCA TTTGGAGAAG
ATCCCCCAGT TGGTGGCGGA TTGGGCCATG GTCAACCTAG AAGATGGGGT GGGCGATAAG
CAGGCCGCGC GACAGTTGGT CGCCGAGACC CTCGGGGCGA TGGATCCCGC CGTGGTGGCA
GAACGGGTGG TGATTCGCAT CAACCCCATG GAGCGGGGCG GCATGAAAGA TCTCCGTGCC
CTTAGCCATC TGCGGCCCCG CGCCTTCCGT CTGCCCAAGG TGGAGGATCA AGAGACCCTG
CACATGGCCC TGGGTATGAT GGATGAAGCG GTCGAGCTAC ATTTTACGGT GGAAACCCGC
GCAGCGTGGA ACATGCTGGA GCGCTTTAAG ATCGACAACC GCGTCACCAC CGCCTACCTG
GGCATTCTGG ATCTTATGGC CGACTTGGGC ATTCCCCAAT CGCTGCTTAA ACCCGACAAC
CCCACCATTG ACTATATTCT GGCCCATTTT CTCATTCAGT GCCGCAGCAT TGACCTCTTG
CCGGTCTCCT TTGTCTATCA GGATCACCGC AATTTGGCCG AGTTGGAGCG CTGGTGCGAA
AAGGTTAAAG CCATGGGCTA CACCGCCAAG GGGTGCATCG CCCCGGCCCA GGCTGAGGTG
ATTAACCGCT GTTTTGCCCC AGACCCTGCC GCCTTAGCCC GTGCCCAAGC GATTATCAGC
CGCTTTGCCG CCCAGCGTGA GCAAGGCGTT ACCGGCTTTG TGGACCCCGA CTATGGTTTT
ATTGATGAAC CCATTGTGCG CGACGCCCAA CGTCTGCTCC AGATGAGCCC CAGGGAGCCC
AGCCATGCGG ATGATTGA
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| Protein sequence | MSVVRSIMMV AGDKPRHLEK IPQLVADWAM VNLEDGVGDK QAARQLVAET LGAMDPAVVA
ERVVIRINPM ERGGMKDLRA LSHLRPRAFR LPKVEDQETL HMALGMMDEA VELHFTVETR
AAWNMLERFK IDNRVTTAYL GILDLMADLG IPQSLLKPDN PTIDYILAHF LIQCRSIDLL
PVSFVYQDHR NLAELERWCE KVKAMGYTAK GCIAPAQAEV INRCFAPDPA ALARAQAIIS
RFAAQREQGV TGFVDPDYGF IDEPIVRDAQ RLLQMSPREP SHADD
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