| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1171 |
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| Symbol | |
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| ID | 4482433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1471907 |
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| End bp | 1473334 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639721914 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_865088 |
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| Protein GI | 117924471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0333328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCCG AACCTGTGGA AAAAACTTTA CATGCCGCCA TGCAACTGAT TCTGGATTTT
CTACAGGAAA ACCAAAACAG TACCCTTCGA ATTGTGGATT TTCTCCCACC CCAACAACTG
GCCGAGCAGT TCGATCTGAC CATCCAGCAG CAGGGTCTGG CCAATCATCA GGCGCTCATC
CCCCTGCTGC ACGCCTATCT CCAACACAGC GTCAAAACCG GCCACCCCCA GTTTTGTAAC
CAACTCTTCG CCGGCTTTAA CTTTCCGGCC TTTCTGGGCG AGGTCTTTAC CGCCCTCACC
AACACCTCCA TGTACACCTA CGAGGTCGCC CCCCTGGCTA CCTTGATGGA ACGCTTTCTC
ATCGAAAAAA TGGGCAAATT GGCTGGCTTT ACTAACCATG ATGGCATCTT CTCCTCCGGG
GGCAGTAACT CCAACCTAAT CGCCATGCTC TGCGCCCGCC AACAGCGCTT CCCCCATATC
AAACAGCTGG GCAACAGCAA CGCGCCACCC TTGGTCTGTC TGGTCTCGGA TCAAGCCCAC
TACTCCTTTC AACGCGGGGC GATGGTGCTG GGCATGGGCT TGGATAATCT GGTCAAAGTC
GCCAGCGACC CCCAAGGCCG CATGCAACCC GCCGCCCTAG AGGCCGCCAT TCTCCACGCC
AAAGCCGCCG GTAAACAGCC CTTTATGGTG GCCGCCACCG CCGGCACCAC CGTGCTGGGT
GCCTTTGACC CCCTCCCCCA GCTCCACGCC ATTGCCCGTC AACACGGCCT CTGGTTCCAT
GTGGATGGCG CCTTCGGGGC CTCGGTGCTG CTCAGCCAAC GCTGGCGCCA CCACCTCGAT
GGCTGCCACT TGGCCGACTC CTTGACCTGG GATGCCCATA AAATGATGAA CATCCCCCTC
ATCAGCTCGG TCATTCTGGT GCGCGAACCC GGCCTGCTGC GCGAAGCCTG CGGCTCTGAA
GGGGGCCACT ACCTCTTCCA CGAACACGAT TATGATGTGG ATCAGTTTGA ACTGGGACGC
AAATCCCTCG CCTGCGGTCG CCGGGTCGAT GCCATGAAAC TGTGGCTGGC GTGGCGCTAC
TATGGAGACC TGGGCTATGC CGCCCGCATA GATCACCTGT TCGAACTAAC CGCCTACGCC
AAAGATTGCA TTCTCGCCCA CCCCAAATTA ACGTTGATGG TCGAACCCCA ATCGGTGACA
CTCTGCTTTC GCTACCAGCC CGACAAAACC GTGGATCTGG ACGCCTTTAC CGTCCGTTTG
CGGGATCGTT TGGTGCGCAG TGGTGATTCG CTGGTCAACT ACTCCCTGTT ACAGCAGGGG
GTGGCCATTC GCATGGTCTT TGTCAATGGT GACATGCAAA CTTCAGATTT TGACCACTTT
CTGGAACGCC TGCTCATCCA TGCCCAGGCA CTGGAAGCGG AACTGTAA
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| Protein sequence | MEPEPVEKTL HAAMQLILDF LQENQNSTLR IVDFLPPQQL AEQFDLTIQQ QGLANHQALI
PLLHAYLQHS VKTGHPQFCN QLFAGFNFPA FLGEVFTALT NTSMYTYEVA PLATLMERFL
IEKMGKLAGF TNHDGIFSSG GSNSNLIAML CARQQRFPHI KQLGNSNAPP LVCLVSDQAH
YSFQRGAMVL GMGLDNLVKV ASDPQGRMQP AALEAAILHA KAAGKQPFMV AATAGTTVLG
AFDPLPQLHA IARQHGLWFH VDGAFGASVL LSQRWRHHLD GCHLADSLTW DAHKMMNIPL
ISSVILVREP GLLREACGSE GGHYLFHEHD YDVDQFELGR KSLACGRRVD AMKLWLAWRY
YGDLGYAARI DHLFELTAYA KDCILAHPKL TLMVEPQSVT LCFRYQPDKT VDLDAFTVRL
RDRLVRSGDS LVNYSLLQQG VAIRMVFVNG DMQTSDFDHF LERLLIHAQA LEAEL
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