| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1150 |
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| Symbol | |
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| ID | 4482760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1438645 |
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| End bp | 1440885 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721893 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_865067 |
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| Protein GI | 117924450 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCAC AACAGAGACG ACACCGTTCC AGGGCAAAAA AGGCATGGCA AGTTGCGCTT
TTATCCATCG CAGCGACCCT TGCGGCGTGC TCAACCCAGT ATGAGCCGGT TCGCGATGGC
GATGTGGCCA ACCGGATGCT CTCGGATTTG GAGATTCTCA CCGCCAACCA ACAATGGAAC
AGCACCAACC AACCCATTAC CCTCTATGAA GCAATGGCCC GTGCCATTAA GTTAAACCTA
GAGAAGCGCG TCGCCCTCAT GGAGGAGAGC ATCTCCGCTG GTGAAGCAGA TTATGCGAAA
TATGCCTTGT TCCCTCAGGT TAACACAAGC TATGGGCTAA CCCATCGCAA CAATGAGCCC
GGCAGTTATA GCGCCAATCC GATTGATGGA GCCATCAGCA GCCAACCCTC TAGCTCGGAC
AGCAAAGATA GTGTCACCGC CAACCTACAG GTGGTGTGGA ATGTGTTGGA CTACGGCGTA
AGCTACGCGC GCATTCGCCA AGCCAAGGAT CGCCAGCAGA TCGCCCAGGA GAGCCGCCGC
CGCATTGTGC AACAGATTGT GGAAGAGGTA CGCAATGCCT ATTGGCAAGC AGTGGCCGCC
ACTAAGGTAG AAGAACGCCT AAACCAGTTG GATTGGCGCA TTAAAAAGGC ACTTTCCGCC
TCGCAACAGT TGGAACAGCG CCGCTTGCAG AGCCCCGTCA AAGCGTTGGA GTATCAACGT
ACCCTGATGG AGCTGGAGCG CAAGGTCGCC GGCATGCGCC ATATGGTGTG GAACGCCAAA
TCCCAACTGG CGGCGTTGAT GAACCTTAAA CCCGGCACCG ACTATAAGCT GTTTCTACCC
CCAGAGCCCA TGCCGGTATT GGACCCGATC CTCTTTTTAC AGGGGCGCGA CCTGATACGC
ATGGCCCTGT TTAATCGCCC AGAGCTGCGC CAAGCGGATT ATAAATTAAG AATCTCTGCC
GAAGATATGC AGATTGCCTA TCTGCGCAAG TTCCCCAATA TCGAACTGGC TGGTGGCTTT
AACTGGAGCA GCAATGAACT GCTGCTCAAC GACACCTGGA ACACCCTGGC GTCGCAGTTT
TCCAGCAACC TGGTGCAGAT GTTTAGCGCC GAAGAGGCCA TGAAGCTGGC AAAGGACAAA
AACCACCTAG AAGAGCTGCG CCGTCTGGCC ATGACCGTAT CCATCATGAC CCAGGTGCAT
ATTGCCCAGC AGCGGGTGCG GCTCTCCATG CAGAACTACG ACCTATCGTT GCGCATGAAC
AATGTCAACA CGCGCATTCT TAACCATGTT TCGTTGGAGT CAAAAACCCG CGCCAAAAGT
GATTTGGAGC TGGTTATTAG CGAAGCCAAC CAAGTATCGG AATATGTTCG CAGTTTAATT
TCTTACTCCG AATACCAAAA TGTGCTGGGT AAGCTCTACA CCGCCATCGG CATTGATCCC
GTTGAAAATT TTCAACTCGA CGCCCCCTTA CCCACCTTAA CCCAACAAAT TTATTCCAAT
CTGGCTCAAG CCAATAACAA GCTTTTTTAT GAAGTTAATA AGATGCACAG CCATCTTTCC
CATCATGCGG CTTTGCGTTA TGGTAGCCTA CAAATGGGGG GGCAACCCCA TTTTACCGCC
CAGCACTATC AGGGCGTGGA ACTGCCCAAA ACAGGTTTGT GGAAGCAAGT AAGCAGCTGG
TTAGAGTGGG CTGGCGGTAA TGACCAGATG CCCGACAATG CCATTATCTA CCCGCAAGCA
GCCACCGCCC TACCCCCCCA AGGGACACGC CCCATGCCTG CCCCACAACC ACCGCAGCAA
CAACCGATGG TCCCTATGCA AGGGGGGCTC GCCCAGCGCC CCCAGCCCAT TCCACAACAA
GCGAGCTACT ACACCCTGCA CTTAGGGGCT TATCAAAATC CCCAGCAGCT GGAGCAACAG
ATGCAACAGC TGCGTAAACA GGGCTATCAA CCCTACGCCA CCGCCTATCA GGATCAGCAA
GGCACCCAAT GGAACGGGCT CTATCTCTGG CAATTTCCCT CCCTGGCCCA AGCGGAGCCC
ATGCGCCAAA AATTGGCGCA TCAGTTAAAC CGGCAGATTG GTATCGCCCA AATGGGAGGC
ATCGCGCCCC AGGCCGCGCC CCAACAGGCG CCCAGTTTGA GGCGCCAATC CGCGCAACAG
ACCCAGGCAC TACCCTATAT TGACCCCCGT GACTATGTGG CCCAGGCCAA CAAGCCCTTT
TGGACGGATT GGTTTCAATA A
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| Protein sequence | MSAQQRRHRS RAKKAWQVAL LSIAATLAAC STQYEPVRDG DVANRMLSDL EILTANQQWN
STNQPITLYE AMARAIKLNL EKRVALMEES ISAGEADYAK YALFPQVNTS YGLTHRNNEP
GSYSANPIDG AISSQPSSSD SKDSVTANLQ VVWNVLDYGV SYARIRQAKD RQQIAQESRR
RIVQQIVEEV RNAYWQAVAA TKVEERLNQL DWRIKKALSA SQQLEQRRLQ SPVKALEYQR
TLMELERKVA GMRHMVWNAK SQLAALMNLK PGTDYKLFLP PEPMPVLDPI LFLQGRDLIR
MALFNRPELR QADYKLRISA EDMQIAYLRK FPNIELAGGF NWSSNELLLN DTWNTLASQF
SSNLVQMFSA EEAMKLAKDK NHLEELRRLA MTVSIMTQVH IAQQRVRLSM QNYDLSLRMN
NVNTRILNHV SLESKTRAKS DLELVISEAN QVSEYVRSLI SYSEYQNVLG KLYTAIGIDP
VENFQLDAPL PTLTQQIYSN LAQANNKLFY EVNKMHSHLS HHAALRYGSL QMGGQPHFTA
QHYQGVELPK TGLWKQVSSW LEWAGGNDQM PDNAIIYPQA ATALPPQGTR PMPAPQPPQQ
QPMVPMQGGL AQRPQPIPQQ ASYYTLHLGA YQNPQQLEQQ MQQLRKQGYQ PYATAYQDQQ
GTQWNGLYLW QFPSLAQAEP MRQKLAHQLN RQIGIAQMGG IAPQAAPQQA PSLRRQSAQQ
TQALPYIDPR DYVAQANKPF WTDWFQ
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