| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1123 |
|---|
| Symbol | |
|---|
| ID | 4481725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1410494 |
|---|
| End bp | 1411072 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639721870 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865044 |
|---|
| Protein GI | 117924427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000958829 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGCAA AGAAATCGAA ATTCACCTGG AGAGATATCA AGGCTGCTCT GCAGGGGCAA
AACCATGAGG ACCTGATTAA ATTAGTTGGC GAGCTTTATT CATTAAATAA GGACAATAAA
CACTTTCTTG AGTCTAGGAT TGATCAGACA GCGGGTAGGC TGGAGCCATA CAAGCAGATC
ATAGATGATG CTGTATATCC TGATATTTAC TCCAACCGAC CAATTCAGAT TGCAGTTGCT
AAGAAGGCGA TCAGCAACTA CAAAAAATCC CGCCCTGATG ATCTGTTGGG GCATCTGGAG
TTGATGGTGT TTTTCGTCGA GCGGGCAAAC AGCTACACAG TGGATTTCGG TGATATTAAT
GAAGGTTTTT ACACATCAGT TGAGACCATG TTTGAAAAGG CGTCAGAACT GATAAAACAG
GCAGATCCTA ATGTTCACGA TGAATATATC CCAAGGCTGG AACAAGTTGT GAATGATGCG
CATGGTATTG GCTGGGGTTA TTTTGATGGG CTAGCCAGTA TGCTGAACGA GCTCTATGCA
AGCGTAGACT GGGATGAAGA TAAAATTCAA TTTCATTGA
|
|---|
| Protein sequence | MGAKKSKFTW RDIKAALQGQ NHEDLIKLVG ELYSLNKDNK HFLESRIDQT AGRLEPYKQI
IDDAVYPDIY SNRPIQIAVA KKAISNYKKS RPDDLLGHLE LMVFFVERAN SYTVDFGDIN
EGFYTSVETM FEKASELIKQ ADPNVHDEYI PRLEQVVNDA HGIGWGYFDG LASMLNELYA
SVDWDEDKIQ FH
|
|---|
| |