| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1101 |
|---|
| Symbol | |
|---|
| ID | 4482238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1380973 |
|---|
| End bp | 1382169 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639721850 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_865025 |
|---|
| Protein GI | 117924408 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAC AACTCAATCG CTGGGCCCAG AGTTGGGGTG GGTGGCGTTC GCCAGAGATG
CTGCTACTGC TGTTTTCGGC GGCGTTGCCC TTGGCCTTTA GCACATGGCG GGCGCTGCTT
AATAACTATG TGGTGGAGCA GGCGGGCTTT GACGGGGTAG AGATTGGTCT GCTCCAGAGC
TTGCGTGAGG TGCCAGGGCT GTTCTCTTTC ACCGCAATTT TTCTGTTGCT GGTTTTTCGT
GAGCAGCGGG TGGCCTTGCT GATGTTGGCT ATGACCGGGC TGGGAACCGC CATGACCCCT
TGGTTTCACT CCCCAGAAGG GCTCTATTTT ACCACCATTG TCATGTCGAT GGGGTTTCAC
TATTTTGAAA CCATGCGCCA ATCCTTAACC TTGCAATGGA TCGACCGCGA GCGCACCCCC
ATTTTACTGG GGCGGCTGGC GGCGGTGCGT GCTTTTGGGG CTTTGGTGGC CTTTGCCGGG
CTCTATGTGG TGCTTACTCT GCTGCATTGG GACTATCCCC CTGCCTATAT GTTGGGGGGT
GGGTTGACCA TGGCGTTGGC CCTAGTGGGT TGGTGGCTGT TTCCGCAGTT TCCAGAACGG
GTTCAACAAC ACCGTAAACT GATTGTGCGC AAACGCTACC TGCTTTATTA CCTGCTTACT
TTTATGTCAG GGGCAAGGCG GCAAATCTTT GTGGTGTTTG CCGGATTTTT GATGGTGGAG
CGCTTTCACT ATGGTGCGGA CCAACTCACC TTGCTGTTCT TAGTTAACTG CATCATCACC
CTTTGGTTGG CACCATGGGT GGGACGTTGG GTAAGCCGCT ACGGTGAACG TACCATGCTT
GTATTGGAGT ATGCCGGTCT GATTGGGGTG TTTGCCGCCT ATGCCATGGT ACAGAGCCAT
TGGGTGGCCG CAGGGCTCTA TGTGCTGGAC CATCTGTTTT TCTCCATGGC GTTGGCGTTG
AAGAGCTATT TTCAAAAAAT TGCCGATCCA GCGGATATTG CACCAACGGC AGGGATCTCC
TTTACCATCA ACCATATCGC GGCGGTGGTG TTACCCGCCC TGCTGGGGGT GGTGTGGATG
GAGAGCCCTA GTATGGTGTT CTGGATAGGC GCGGCCATGG CCGCGCTCTC TTTGCTGCTG
GCAACCCAGG TGCCGCGTCA TGAGACAAGG GTGGCCGAGG CCGCCGGGGT GGCGTGA
|
|---|
| Protein sequence | MVKQLNRWAQ SWGGWRSPEM LLLLFSAALP LAFSTWRALL NNYVVEQAGF DGVEIGLLQS
LREVPGLFSF TAIFLLLVFR EQRVALLMLA MTGLGTAMTP WFHSPEGLYF TTIVMSMGFH
YFETMRQSLT LQWIDRERTP ILLGRLAAVR AFGALVAFAG LYVVLTLLHW DYPPAYMLGG
GLTMALALVG WWLFPQFPER VQQHRKLIVR KRYLLYYLLT FMSGARRQIF VVFAGFLMVE
RFHYGADQLT LLFLVNCIIT LWLAPWVGRW VSRYGERTML VLEYAGLIGV FAAYAMVQSH
WVAAGLYVLD HLFFSMALAL KSYFQKIADP ADIAPTAGIS FTINHIAAVV LPALLGVVWM
ESPSMVFWIG AAMAALSLLL ATQVPRHETR VAEAAGVA
|
|---|
| |