Gene Mmc1_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1068 
Symbol 
ID4481355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1306840 
End bp1307679 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content42% 
IMG OID639721816 
Producthypothetical protein 
Protein accessionYP_864992 
Protein GI117924375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.30522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.456867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TAGCCTGCCA ATATACTATT GTACGGTTTG CGCCCTTTGT AGAAACTGGC 
GAGTTTGCCA ATGTGGGTAT CCTTATGATA GCTCCAGATC AGCGCTTTTT CGCTTTTAAC
CTGGAAACCC GTCGTTACGC CAGAATTACT CACTTTTTTG ATGAACTTGA TCCACAGATT
TACTGTGCAT CATTACATGC ACTTAAAGGT GAATTCGAGC GCGTGCAACG GTTATTAAAT
GACCACGATT TTTATGGTAG AACAAAAAAT GTCACGGCAG ATTTCGTGAG GGAAATGTTT
GGGGAGATTG TCAGGCCACG TGAAGGCATC ATTCGATATG CAGAACCTAG AATCGTACTG
ACAGAAGATC CAAAACAAAA ACTAAATGAT CTTTTTGCTT TTTATGTAGA GCGTAATTTT
ATCACCAAAC AGTATGAAGA GTGTGTGCTT GAAAAAGGGA TGCGAAAATG GCTTTCTCGG
GTGCAACTTG GAGATCGCTT TCACAAAATG CCTATTGGAG ATGCTGAGTA TCACGCCACA
TTTCCATTTG TTCAAGTTGA TCATGATACC CCTGTAAAAA TAATCAAGCC TTTGCATCTG
GCTCAATCTA AACCAAGCAA AATTATTGAT CACGGTGGAA CATGGGCTTT TCGCCTAACC
GAACTCAGTC GCCGCAAAAC ACTTCCTGAA AAAGTCCTGT TTTCAGTCTC TGGCCCCGAT
CAAATGGATG AGAAACGGTA CGCTGCCTTT GAAAAAGCTG TAGATTGCTT GAAACATACA
GGGATCGAAG TTGTGAACCA CACGAATCGA GATAGAGTTC TTGCTTTTGC AGGAGCTTGA
 
Protein sequence
MEKIACQYTI VRFAPFVETG EFANVGILMI APDQRFFAFN LETRRYARIT HFFDELDPQI 
YCASLHALKG EFERVQRLLN DHDFYGRTKN VTADFVREMF GEIVRPREGI IRYAEPRIVL
TEDPKQKLND LFAFYVERNF ITKQYEECVL EKGMRKWLSR VQLGDRFHKM PIGDAEYHAT
FPFVQVDHDT PVKIIKPLHL AQSKPSKIID HGGTWAFRLT ELSRRKTLPE KVLFSVSGPD
QMDEKRYAAF EKAVDCLKHT GIEVVNHTNR DRVLAFAGA