Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1021 |
Symbol | |
ID | 4482342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1253185 |
End bp | 1254339 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639721769 |
Product | inner-membrane translocator |
Protein accession | YP_864945 |
Protein GI | 117924328 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.744628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.313599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACCTA TAAGCAAGCG CATCGGGTTT TTGTTGGGGG ATCGTGGGGG GATGGCTCTG CTGGTGTTGG TATTGGGGGC GGCCATTGTG GTGCCCATCC TTAACCTGGC GGTGGCGCCA GAGAGCCCCT ATCACATCCC CAACTATGTG GTCAGTTTAA TGGGGAAATA TCTAGCTTTT GCGCTGTTGG CGCTGTCGGC GGATCTGATC TGGGGCTATG CGGGCATTTT AAGTTTGGGG CATGGTGCTT TTTTTGCCCT GGGTGGCTAT GCCATGGGCA TGTACCTTAT GCGGCAGATT GGGGATCGAG GGGTCTATGG CAACCCAGAG CTGCCGGATT TTATGGTCTT TCTCAACTGG CACGAGTTGC CCTGGTATTG GCACGGTTTT GAGTGGTTTG CCTTTGCCGC GCTGATGGTC CTGGTGGTGC CGGGGCTGTT GGCCTTGGTA TTTGGTTGGT TTGCCTTTCG CAGCCGGGTT ACGGGGGTCT ATCTCTCCAT CATTACCCAG GCGATGACCT ATGCGCTGCT GCTGGCGTTT TTCCGGAATG ATATGGGCTT TGGTGGCAAC AATGGTTTGA CCGACTTTAA AGATCTGCTG GGTTTTGACC TGCATGACGA TACCACCCGT GCGGCGCTGT TTAGTGTCAC GGCGCTCGCT TTGGCCCTGA GTTATGGGGT GTGCCGATAC ATCACCGCCT CCAAACTGGG GCGGGTGCTG TTGGCGGTGC GGGATGCCGA AAGCCGTACC CGTTTTATGG GGTATCGAGT CGAAAACTAT AAACTGTTTG TGTTTGTGGT GGCGGCCATG ATGGCCGGTT TGGCCGGGGC GTTGTATGTG CCCCAGGTGG GCATCATCAA CCCTGGCGAG TTTTCGCCAG GGAACTCCAT TGAGATTATT ATCTGGGTAG CGGTCGGGGG GCGCGGCACC CTGTATGGGG CGGTGCTGGG GGCTGTTTTG GTCAACTATG GCAAAACCTA CTTTACCGGT GCCCTGCCCG AGGCGTGGCT CTACATGTTA GGCGCTCTGT TTGTGGCGGT GACCCTGTTT ATGCCCCAGG GGGTGGTGGG GTTGGTGGCC CAGTGGAAGA ACCGGCTACG GGCTCGCAAA GCCCCGGCCC AGGGGGATCA TCAGGTGGCG GAGGTGGGCC AATGA
|
Protein sequence | MGPISKRIGF LLGDRGGMAL LVLVLGAAIV VPILNLAVAP ESPYHIPNYV VSLMGKYLAF ALLALSADLI WGYAGILSLG HGAFFALGGY AMGMYLMRQI GDRGVYGNPE LPDFMVFLNW HELPWYWHGF EWFAFAALMV LVVPGLLALV FGWFAFRSRV TGVYLSIITQ AMTYALLLAF FRNDMGFGGN NGLTDFKDLL GFDLHDDTTR AALFSVTALA LALSYGVCRY ITASKLGRVL LAVRDAESRT RFMGYRVENY KLFVFVVAAM MAGLAGALYV PQVGIINPGE FSPGNSIEII IWVAVGGRGT LYGAVLGAVL VNYGKTYFTG ALPEAWLYML GALFVAVTLF MPQGVVGLVA QWKNRLRARK APAQGDHQVA EVGQ
|
| |