Gene Mmc1_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0946 
Symbol 
ID4482745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1164237 
End bp1164551 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content50% 
IMG OID639721694 
Productanti-sigma F factor antagonist, putative 
Protein accessionYP_864870 
Protein GI117924253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000349571 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00179777 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTACA TGGAGGATGG TGAGATTGAG ATCTCGCAAG GGAAGCAGGA GACGGTGGTT 
AAAATTTTGG TGCGTTTTGC CGCCAAACAT ATGCACGTTA TAGATACCCT AGCACCCGCA
ACAGATCCGG AGCATCTGTT TGTGATCGAC CTGAGCCAAA CCCGCTATTT GGACTCATCA
GGATTGGGTT TTCTGCTGCG CTTGCGTGAG CAAGTGAAAG GAACAGCAAA AAATTTGGTG
GTCCGTGGGG CCAGCCTGGA GATGCGCACT CTTTTAGAAT CGGCGCAGTT TAATCGCCTG
TTCCGCATTG AATAG
 
Protein sequence
MSYMEDGEIE ISQGKQETVV KILVRFAAKH MHVIDTLAPA TDPEHLFVID LSQTRYLDSS 
GLGFLLRLRE QVKGTAKNLV VRGASLEMRT LLESAQFNRL FRIE