| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0938 |
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| Symbol | |
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| ID | 4481590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1153851 |
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| End bp | 1156220 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639721686 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_864862 |
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| Protein GI | 117924245 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0230287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGA CCCCGCCTAG CCCATTGGTA CTGGAGAGCC CTGCCCAAGA GGGGTGGATC
GCAGAAGAGC GCATCACCTG CCACCAGTGG ATTCCCCCCG AGGTCGAGCC GGTAGAGCGG
GAAGGTCGTT ATTACTATGC CCTCAAGGAT ATCGTACCGC TGCGTTCGCG CAAGGCTTGG
AAAAAGAAAG GTCGCCGCAT TCCCCAAGAT GCTGAGCCCC TATCCCACAC CGAAGGGGAG
CACCCCACCC CACTGTTTGC CTATCACCAA AGCGTGAATG AGCGGGAGTT TTTAGAGCTT
CAGCGCGAGG CCATGACCGA ACGTTGCGCC CAGTGGAACC AGGCTTGGCT GAGCTTGGAC
GAGGCCCGCA GCGATCTGTT GAGCAAAATG GGCGAGCAGC GCCCTGAAGA GGTAGAATTT
GACCTGCAAG AGCTGTTACG CCGCTATCGG GAACTGGTGG ATCAGCATGC TCATTTGCTG
CGCCCAGCCC GTGAGTTGGA GCTGGATTTA GGGGAACTTA CCCATGCGAT CTGGTTCGAC
ACCCTCAACG CCTACCGTCG TTACCGAGAC CAAGCCGCGT TGGAGGATCT GGAGGAGCGC
AACGATGCCC TCGCCCGCCC CATTTTGGAG CAGATGCGCC ATCAGGAACA AGAGAGCCAG
GACCCCTTTG CATTACAGCC CTTTTGGGAG TTTTACGGCA AGTTTCACAA ACGCTATGAG
GGGGCGCTGT TTGAACACCA GATTGCCAAA GCGACCCGCA TTGAGGAGTT TCATAATCTT
TTCCCCGCGC GGGAGAACTA CCGCCGGTTC ACGCTCTATC TTGGCCCCAC CAACTCGGGC
AAAACCTATC AGGCGCTGCA ACGCCTCAAG GATGCCGCCA CGGGCTGTTA TCTGGCCCCC
TTGCGGCTGT TAGCCTTGGA GGTGGCCGAC ACCCTCAACG AGTGGGGGGT GCCGTGCAGT
ATGGTTACGG GCGAGGAGCG TATTTTGGTC CAGGGGGCCA AGCATACCGC CAGCACCATT
GAGATGCTCT CCACCCACAC CCGCTATGAT GTGGCGGTGA TTGATGAAGC CCAGATGGTG
GGGGATGCAG ATCGAGGCTG GGCCTGGACT CAGGCCATTT TGGGGGTACG TGCCAAAGAG
GTGTGCGTCA TTGCAGCGCC GTCGGCCCGC CCGGTGATTG AAAAACTGTT ACGCCTGACC
GAAGAGCCCT GGGATGTGGT GGAGCTGGAG CGTTTAACCC CCTTGCAGAC CATGAGCAAA
CCGGTGGAAG CCCTCGCCGA AATGGAGCCA GGCACGGCCT TGGTGGCCTT TAGCCGTGCC
CAGGTGTTGC GTCTTAAAGC GGAGGTTGAG CAGGCCACGG GCAAAAAGTG CGCTGCTCTT
TACGGGGCGC TCCCCCCCGA AGTGCGCCGC ATGCAAGCCA GACTGTTTAA TAGCGGCGAA
GCACCCTATT TGGTGGCAAC GGATGCCATC GGCATGGGGC TTAATCTGCC CATCAAAACC
ATTCTGTTTG CCCAGGATCG CAAGATGATC AATCGCACCG AGCACCTACT AACCCCAATG
GAGGTTAGGC AGATTGCAGG GCGGGCGGGT CGTTTTGGTA AAAATGAGGT GGGTTATGTG
GGCACCTACC GCATTGGTAC GGCCCATATT AAACAGGCGT TGCTGGCGGT ACCCTTTGAT
GTCAAAAAGG CCCACTTGGC CCCCAACTTG GACCATCTTA CCGCCATTGC TCAGTTACAG
GAGGATCAAA AGCTACGGTT AACCCGGCTG TTTACCCTCT TTATCAAGAC GGTCAAGCCC
GACCCTGCCC TCTATGAACT GGCCGATTTG GACGACCAGA CCACCCTGGC GCGCATTGCT
GATCGACATA AACAACTGGA TCTACCGACC CGTTTTATGC TCTCTGCGGC CCCGGTGCCG
CTGCGGGCCA CGGTGGTGGT AACGGCGTTT GAACATATGG TGGCGGCCAT TGCTAAAAAC
AGCCCCATCA CGCTGCAAGA TGCACTACCC ACCCCACCCC ACAAAGCGGA CCCCAACCGG
TTGGTCAAGC TTGAGGATGC GGTAAAAATC GTCAATCTCT ATTGTTGGTT ACACTTCCGC
CAAGAGCAGC TCTTTCCCGA TCTTGCCGAG GCTGAGGGCC TACGCGCCCA TTTAAATACC
GAGATTAATA CCCTGCTGGG TCGCCCCCGC AAGGTGCGCG AGGCCGGACA TTGCGATAAG
TGCCACGCCC CTTTGCCGGA ACATTGGCGC GGTAAACTTT GCCGCCGTTG CGAACCACCG
GGTCGTCGGC ATACCGAGCA CCCCCCACGC GGTGGTCGTA AACCCATCAA AAAAGAGCCC
AACAAACGCA ACCATGGTCG CCATGGCTAA
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| Protein sequence | MPETPPSPLV LESPAQEGWI AEERITCHQW IPPEVEPVER EGRYYYALKD IVPLRSRKAW
KKKGRRIPQD AEPLSHTEGE HPTPLFAYHQ SVNEREFLEL QREAMTERCA QWNQAWLSLD
EARSDLLSKM GEQRPEEVEF DLQELLRRYR ELVDQHAHLL RPARELELDL GELTHAIWFD
TLNAYRRYRD QAALEDLEER NDALARPILE QMRHQEQESQ DPFALQPFWE FYGKFHKRYE
GALFEHQIAK ATRIEEFHNL FPARENYRRF TLYLGPTNSG KTYQALQRLK DAATGCYLAP
LRLLALEVAD TLNEWGVPCS MVTGEERILV QGAKHTASTI EMLSTHTRYD VAVIDEAQMV
GDADRGWAWT QAILGVRAKE VCVIAAPSAR PVIEKLLRLT EEPWDVVELE RLTPLQTMSK
PVEALAEMEP GTALVAFSRA QVLRLKAEVE QATGKKCAAL YGALPPEVRR MQARLFNSGE
APYLVATDAI GMGLNLPIKT ILFAQDRKMI NRTEHLLTPM EVRQIAGRAG RFGKNEVGYV
GTYRIGTAHI KQALLAVPFD VKKAHLAPNL DHLTAIAQLQ EDQKLRLTRL FTLFIKTVKP
DPALYELADL DDQTTLARIA DRHKQLDLPT RFMLSAAPVP LRATVVVTAF EHMVAAIAKN
SPITLQDALP TPPHKADPNR LVKLEDAVKI VNLYCWLHFR QEQLFPDLAE AEGLRAHLNT
EINTLLGRPR KVREAGHCDK CHAPLPEHWR GKLCRRCEPP GRRHTEHPPR GGRKPIKKEP
NKRNHGRHG
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