Gene Mmc1_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0879 
Symbol 
ID4483372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1075785 
End bp1076633 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content53% 
IMG OID639721628 
Productglutamine amidotransferase, class-II 
Protein accessionYP_864804 
Protein GI117924187 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.546334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0807844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGAAC TGTTCGCCAT GAGCAGCCGA CTGGCCGCCA CCATTAATTT TTCCTTGGAG 
GAGTTTGCTC GGCACGGTGG CATGCAAGGC CCACACAAAG ATGGTTGGGG AATTGCCTTT
TATGAGGAGT ATGACGCCCT GATCTTACGG GCCCCAGAGC CTGCCTCTGA AAGCCAGTTG
GTTAAATATA TTGAAAAAAA CTCCTTTCAC AGCAATTTGG TGCTCTCCCA TATCCGCAAA
GCAACCCATG GCGAGGTGTG CCTCAAGAAC ACCCACCCTT TTAGCCGTGA AATCGGTGGG
CGGCTGCATG TATTTGCCCA TAATGGCGAA TTCCCCGGCG TCCGCAGCCA CCCTGACTAC
AAACTCAATA TTTTCCGCGC CATTGGCAGT ACCGACTCGG AACACGCCTT TTGCCTATTG
ATGGACTGTT TAACCGATGT TTGGCTCAAT CCAACCCCAC CCTCGCTTGA ACAGCGCCTA
TCCATACTCG TTACATTCAC CCAGCGCATG GAACACCTTT CGCCCGATGT GCAAGCCAAT
TTTCTCTATA GTGACGGTGA ATATCTCTTT GTTCATGGAC ATGTGCGCCG CCAAGCCAGC
GATGGCATGA TCCGCGCACC CGGTCTCTAT ACCCTCTGTC GCAGCTGCCA CCCCAACAGC
AACAAGCGCC CCAGCCCCAT CACCGGCCTA CGTATGCAAA CGTTTAAACA CGACGGCAAC
CGCCAATATG CCGCGCTCGC CGCCAGCGTG CCCCTAACCG ATGAATCATG GGAACCCTTA
CTGAGGGGGG AAATCGTGGT GATGCAAGAT GGTAAAATCA TTAAAAGGGT TCCACCGCCC
TCCTTATAA
 
Protein sequence
MCELFAMSSR LAATINFSLE EFARHGGMQG PHKDGWGIAF YEEYDALILR APEPASESQL 
VKYIEKNSFH SNLVLSHIRK ATHGEVCLKN THPFSREIGG RLHVFAHNGE FPGVRSHPDY
KLNIFRAIGS TDSEHAFCLL MDCLTDVWLN PTPPSLEQRL SILVTFTQRM EHLSPDVQAN
FLYSDGEYLF VHGHVRRQAS DGMIRAPGLY TLCRSCHPNS NKRPSPITGL RMQTFKHDGN
RQYAALAASV PLTDESWEPL LRGEIVVMQD GKIIKRVPPP SL