| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0783 |
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| Symbol | |
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| ID | 4481072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 979165 |
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| End bp | 982398 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639721527 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_864710 |
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| Protein GI | 117924093 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.105121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTAA TTAAAAACAG CGGCAATGAC AGAGTTATAG ATGAACTGCG CAAGAGCCTG
CCGGCGGGTT CACAGTTGAG CATCGCCTCT TCGCATTTCT CCCTGTTTGC TTTTGCGGAA
TTGCGTGAAC GGCTCGCTAG GGGAAAACAG TGCCGTTTGG TCATGCCAGC GCTTGACTCT
GCCAATATCC AACTGCTGGG AACCGACTCC GACCGGCTTG CCAGGAATCG CCTTCAGAAC
AGATGGCTCG CAGCTCAATG CATGGCGTGG CTCAAGGCCA AGGCCGAAGT CCGTCTCGCT
GCTTCGCCAC TGCCCCAGGC GGCGCTGGTG ACGGAAGGGG TGACGCCGGT GGCAAACCAC
GTCATTACCG GCAACTGTTC ATTTACCACG GAAGGGCTGG GGCTGGCTCC CAACGCGCCC
TTCAGCCTGA TTCAATGCTC GGAGACCGAC GAGGAGTGGC AGCTCTTAAA CGGCTGGTTT
GCAAACCTGT GGTCCGGTCT GCCCAGATCC GATGCCGGAA GCAAGGCGCT GTTGGCAAAG
CTCGGTGAGA TCGCTGACCA CCGTCCCCCA TTTCACGTCT ACCTGATGAT ACTCCACCAT
CTGTTCCGGG ATCTCGGTGA GGAGCTGGAC GAGGAGCGGA TCATCCGCTC TGCCACCGGC
ATCCGTGACA CGGTTGTCTG GCGCAAGCTC TATAAGTTCC AGCGGGATGG CGTCTTCGGA
GCTATCGACA AGCTGGAACG CTTCGGCGGC TGCATCATCG CCGACAGCGT GGGTCTTGGT
AAGACCTTCG AGGCGCTGGC GGTCATCAAG TACTTTGAGC TGCGTAACGA CCGGGTTCTG
GTTCTCTGTC CCAAACGCCT GCGAGACAAC TGGACCCTCT ACAAGGCCAA CGACCGGCGC
AACATCCTCT CCGCCGACCG TTTCAATTAT GACGTACTCA ACCATACCGA CCTCTCCCGG
GATGGCGGGC TGTCTGGGGA GCTTGACCTC TCCTACATCA ACTGGGGCAA CTACGACCTA
GTGGTCATCG ACGAGTCCCA CAACTTCCGC AACAAGCCCA CCCACAAAGG GCGAGAAAGC
CGCTACGAAC GGCTCATGCA GCGGGTCATC AAGGCGGGGG TGCGGACCCG GGTGCTGATG
CTCTCCGCCA CGCCGGTGAA CAACCGTCTG GCCGACCTCA AGAACCAGAT CGCCTTCATT
ACCGAAGGCA ACGACGGCGC GTTCGTGGAT CAGGGCATTC CCAGCATCGA GGCGACCATC
CGCCTGGCCC AGACCCAGTT CAACAAGTGG CTGGACCTGC CCAACGCCGG ACGCCGCCAG
GACATGTTGA CGGAGATGCT GGGTTTCGAC TACTTCAAGC TGCTGGACAT GCTGACCATC
GCCCGGTCGC GCAAGCATGT GGAGAAGTAC TACGGCACCG CCGAGACCGG CAAATTTCCA
GAACGCCTCA CGCCCCGCAA CATCAAGGCC GACGTGGACT CCTCCGGCCG CTTCCCGCCG
GTCCGGGAGA TCAACGACGA CATACGCCGC CTGAATCTGG CTGCCTATGC GCCGTTGCGC
TATCTCCTGC CGGGCAGGCT GGCCGCCTAC GAGGCCAAGT ACGATACCCA GGTGCGCGGG
GGGCAGGGCC GCTTTCGTCA GGTGGACCGG GAAGAGAGCA TGGTTCATCT GATCCGGGTC
AACCTGCTCA AGCGGATGGA GAGTTCCGTC CACGCTTTCG CGCTCACCTT GGAGCGGCAA
CTGACCCAGG TGGATGGGTT GCTGGAGAAA CTCGATTCCC ACATTCAGGA TGTGGAGGCG
CTGTCCATTG ACGAGGTGGA TGTGGACGAT CCCACCTTTG AGACCCTGTT GATCGGAACC
AAAGTCAAGG TGCTGTTGCA GGATGTGGAT GCCATCCGCT GGCGGCAGGA GCTGGAGGAT
GACCATGACC GCCTAGCCCG ACTGCATGCT GAGGCCACCC AGGTTGGATA CGAGCGGGAC
GCCAAGCTGG CAGAGTTAAA GGCACTCATT GCAGACAAGG TAGAAAACCC GCTCAACCCC
GGCAATCGCA AAATGATCAT CTTCACCGCC TTCGCTGACA CGGCGGAATA CCTCTATCGG
GATCTTTCCG TTTGGGTCCG CGCCCAATAT GGCATAGAGA GCGCCCAGGT TACTGGTGCG
GGCGGCAATA AATGCACGCT GAAGAAGATC CGTTCGGATC TGGGTGGCAT TCTGTCATCC
TTCTCCCCTC GTTCAAAAGA ACGGCCTGAA GAGATGGCCC AGGAAGGGGA ACTGGATCTG
CTCATCGCCA CCGACTGCAT CTCCGAAGGG CAGAACCTCC AGGATTGCGA CACTCTGGTC
AACTATGACA TTCACTGGAA CCCGGTGCGC ATCATCCAGC GCTTTGGGCG CATCGACCGC
ATCGGTTCGC CCAACGCCCG TATCCAACTG GTCAACTTCT GGCCTAATAT GGAGCTGGAC
GAGTACATCA ACCTGGAGCA ACGGGTGAGC GGGCGCATGG TGCTGTTGGA CATCTCCGCC
ACCGGCGAGG AGAACGTTAT CGAGCACCAG TCCGGCGACC AGATGAACGA CCTGGAGTAT
CGGCGCAAGC AGCTGCTCAA GCTTCAGGAA GCAGTCATCG ACATGGAGGA GATCGAAGGC
GGCATCTCCA TCACCGATAT GACCCTGAAC GACTTCCGCA TGGACTTGGC CGGATTCCAG
CGCGGGGGCG GCGTGGAACT GGAGCGGATG CCGTTGGGTT CCATGGCGGT GGCCAGCTCC
CTTGGTCTAG GGGATTCCAT CGTGCCACCC GGCGTCATCT TTTGCCTGCG GGCCGAAGCG
GGCGCGGCCC GCGATGGCAT TGATGGAAAA AGCGGGCCGG AGCCGGGCTA TCCGCTCTCG
CCCCACTATT TGGTGCATGT GGGTGAGGAT GGCGCGGTGC TGTTGCCCTT CACCCAGGCC
AAACGGATTC TGGATCGGCT GCGCAAGGTG GCCCTGGAGC GGACCGATGT GGATGCGGCA
ATCTGTGAAC GGTTCGACCG GGCGAGTAAA GGAGGGCGGG AGATGGGGCT GTGGCAGGAT
CTGCTGGCCA AGGGGGTGGG TTCCATCCTC GGGAAAAAAG AGGAGCGTGC TATGGCCAGT
CTCTTCTCTC CTGGTGGCAC CCATGCCATG CAGGGGGAGT TTTCGGGCAT CTACGATTTC
GAGGTGGTGG CTTGGCTGGC TATTTTGCCG GAGGACGGAG AGACCACGGC ATGA
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| Protein sequence | MRLIKNSGND RVIDELRKSL PAGSQLSIAS SHFSLFAFAE LRERLARGKQ CRLVMPALDS
ANIQLLGTDS DRLARNRLQN RWLAAQCMAW LKAKAEVRLA ASPLPQAALV TEGVTPVANH
VITGNCSFTT EGLGLAPNAP FSLIQCSETD EEWQLLNGWF ANLWSGLPRS DAGSKALLAK
LGEIADHRPP FHVYLMILHH LFRDLGEELD EERIIRSATG IRDTVVWRKL YKFQRDGVFG
AIDKLERFGG CIIADSVGLG KTFEALAVIK YFELRNDRVL VLCPKRLRDN WTLYKANDRR
NILSADRFNY DVLNHTDLSR DGGLSGELDL SYINWGNYDL VVIDESHNFR NKPTHKGRES
RYERLMQRVI KAGVRTRVLM LSATPVNNRL ADLKNQIAFI TEGNDGAFVD QGIPSIEATI
RLAQTQFNKW LDLPNAGRRQ DMLTEMLGFD YFKLLDMLTI ARSRKHVEKY YGTAETGKFP
ERLTPRNIKA DVDSSGRFPP VREINDDIRR LNLAAYAPLR YLLPGRLAAY EAKYDTQVRG
GQGRFRQVDR EESMVHLIRV NLLKRMESSV HAFALTLERQ LTQVDGLLEK LDSHIQDVEA
LSIDEVDVDD PTFETLLIGT KVKVLLQDVD AIRWRQELED DHDRLARLHA EATQVGYERD
AKLAELKALI ADKVENPLNP GNRKMIIFTA FADTAEYLYR DLSVWVRAQY GIESAQVTGA
GGNKCTLKKI RSDLGGILSS FSPRSKERPE EMAQEGELDL LIATDCISEG QNLQDCDTLV
NYDIHWNPVR IIQRFGRIDR IGSPNARIQL VNFWPNMELD EYINLEQRVS GRMVLLDISA
TGEENVIEHQ SGDQMNDLEY RRKQLLKLQE AVIDMEEIEG GISITDMTLN DFRMDLAGFQ
RGGGVELERM PLGSMAVASS LGLGDSIVPP GVIFCLRAEA GAARDGIDGK SGPEPGYPLS
PHYLVHVGED GAVLLPFTQA KRILDRLRKV ALERTDVDAA ICERFDRASK GGREMGLWQD
LLAKGVGSIL GKKEERAMAS LFSPGGTHAM QGEFSGIYDF EVVAWLAILP EDGETTA
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