Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0731 |
Symbol | |
ID | 4481375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 899771 |
End bp | 901912 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639721475 |
Product | ABC transporter related |
Protein accession | YP_864658 |
Protein GI | 117924041 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.269341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.324121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTTG AAATTAAAGC CGTTGAGATC CCAAAGGTAA GCGGTATTCT GGCTGAATTT GCCCAGGCAT CCGACTTTGG GGCCTGTATG ATTCCCCTGC TTTCCGCGCT GAATTGGCGT GGCGATATGC GCCATGTGGC AGAATCACTG CCCCACTTTG TGGAAACACT GGACCTCACC GGCTTCCGCA ACATGATGGC CCACCTTAAT TATCGCAGCG AAGATATTCG CATGCCCATT GATAAGGTGG ATGATCGCCT GTACCCCTTT CTCTATATCC CTGACAAACA GGGTGCCATG GTGGTTTTTG GGCGTAATGA AGATGGCAGC CTAGATATCT TTGATGGCTC TTCTGGCGAG CGCTTTAACC TAACCGACTT TAAGGTAAAA GGACGCGCCT TTTTCTTCCA ACCCATGGAT GTCGAAGAGG TTCAGCAAAC CCAATCTCGC ATTGGCTGGT TTCGTATGGT CATGGAGCGG TTTCGCACCT TTTTTTACTA TATTCTAGGT ATTACCTTTG TGATCACCCT ATTGCAGGTG GTCACCCCTC TTTATGTGAT GCAGGTCTAT GACCGGGTGG TCGGTTCGGG CTCTATGAGC ACATTGGCCT TTCTGGTCGG TGGCGCCCTC GCTGCGCTGG GCTTTGACTG GGGCTTTCGG CGCATGCGCG CGGTTATGTT AGGCTACGTG GGGGCGCGCC TTGATAACAT CATTGGCAAC GCCGTCTTTC AGCGTATTCT CTATCTACTC CCCGCCTATA CCGAGCGGGC TACCATTGGC TCTCAGGTCG CGCGGATTCG AGATTTTGAA TCCATCCGTG AATTTTTTAC TGGCGCCCTG GTCGTGGTCT TTCTTGAGCT ACCCTTTACG GTGGTCTTTC TGCTGGTGAT TGCCTCACTG GCTGGTCCTT TGGCCTTTGT ACCCATGGTT ACCATGATTT TGTTTGTCAT CCTGTGGGTG ACGATGACCC CACTGGTGAG CAATTCGGGC GCGACGGCAC GTCGCTTTAG CTCTCAAAAG CAGTCTTTCA TTGTTGAAGC CCTCAACTCC ATGCGGGCCA TTAAATATTG CCGCGCAGAA GATATTTGGC TGGATCGCTT TCGCGAGATG TCGGCCAAGG CCGCCCAAGC AAATTTTAAG ACCTCGTTTA TCAACGCGAT TGTGCAATCG TTGGGGTCGG CATTTATCGT GCTTTCCGGC CTGGGCACCA TCGGTTGGGG GGTGTTGCGC GTCCTTTCGG GGGACATGAC CGTTGGGGGA CTGGTGGCGT GCATGGTGCT GGTGTGGCGG GTATTAACCC CTATGCAGGC CCTGTTTACC GCGATGACCC GGTTAGAGGC GATTCGTGCC TCCGTTGCTC AGGTTAACAA CCTCATGAAT GTTAAACCCG AGCGCGAGCC CCACGCCCCC ATTAAAAAGA TTGCCCAGTT CCGTGGGGAT GTCACCTTTT CACGGGTCTC TATCCGCTAC AGTCAAGAGG CTGACCCTGC GCTGGTTGGC GTCACCTTTG AAGCCAAGGC TGGAGAATGT ATTGTCGTGA TAGGCGGCAA TGGTTCAGGT AAATCAACCC TGGTTAAATT GATTGCCGGC ATTTACAGCC CACAAGCTGG GGGTATTTTT ATTGATGGCC GCGATACCCG GCAGTTGGAC CCCATTGAAT TGCGGCAGGC GATTGCCTAT GTTCCACAAA CGGTCAACCT GTTCCACGGC ACCATTGCAC AAAATCTACG ACTGGCCCAC CCCACCGCCT CCCAAGAAGA ATTAGAGGAC GCGTGCAGCA AAGCTACCGT ATTGGAAGAG ATTTTGGCTT TGCCCAAGGG GTGGTGGACC CGCATTGGCG ACTCTCGCTC TTCTCAGCTT TCGTCGGGAT TTATCCAAAA GCTATCCTTG GCGCGGGCCT ATCTTAAAAA AGCGCCGGTT ATCCTGTTTG ATGAGCCTGC CAACGCTTTG GATTGGGATG CGGACGATGC TTTTCAAAAT GTGGTGAAAG AGTTAAAGGG AAAATCCACC ATTTTCATAG TGACCCACAG TCCCAGACAC CGCAAATTAG CCGATCAACT GCTCTATCTG GAACGGGGCT ATTTGCAGCT TGCAGGCCCT GCCGAAGAGG TAGAAGCGCG CCTGCCAAAA GGGTTGATTT AA
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Protein sequence | MSVEIKAVEI PKVSGILAEF AQASDFGACM IPLLSALNWR GDMRHVAESL PHFVETLDLT GFRNMMAHLN YRSEDIRMPI DKVDDRLYPF LYIPDKQGAM VVFGRNEDGS LDIFDGSSGE RFNLTDFKVK GRAFFFQPMD VEEVQQTQSR IGWFRMVMER FRTFFYYILG ITFVITLLQV VTPLYVMQVY DRVVGSGSMS TLAFLVGGAL AALGFDWGFR RMRAVMLGYV GARLDNIIGN AVFQRILYLL PAYTERATIG SQVARIRDFE SIREFFTGAL VVVFLELPFT VVFLLVIASL AGPLAFVPMV TMILFVILWV TMTPLVSNSG ATARRFSSQK QSFIVEALNS MRAIKYCRAE DIWLDRFREM SAKAAQANFK TSFINAIVQS LGSAFIVLSG LGTIGWGVLR VLSGDMTVGG LVACMVLVWR VLTPMQALFT AMTRLEAIRA SVAQVNNLMN VKPEREPHAP IKKIAQFRGD VTFSRVSIRY SQEADPALVG VTFEAKAGEC IVVIGGNGSG KSTLVKLIAG IYSPQAGGIF IDGRDTRQLD PIELRQAIAY VPQTVNLFHG TIAQNLRLAH PTASQEELED ACSKATVLEE ILALPKGWWT RIGDSRSSQL SSGFIQKLSL ARAYLKKAPV ILFDEPANAL DWDADDAFQN VVKELKGKST IFIVTHSPRH RKLADQLLYL ERGYLQLAGP AEEVEARLPK GLI
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