Gene Mmc1_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0726 
Symbol 
ID4481369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp872562 
End bp873122 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID639721469 
Producthypothetical protein 
Protein accessionYP_864653 
Protein GI117924036 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.58244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.917839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG CCACATTGGC GGGCAAATTT TTGATCGCGG TACCCAGCTT GGCGGATCCT 
TTTTTTGAGC GCACGGTGCT CTATCTCTGT GCGCACAATG AGGATGGCGC TTTGGGTTTG
GTGATTAACC AGCCGCTGGA TACCACCATG AGCCAGATGG CGGGTTATTT AGAGCTAGAT
TGGCAGCGGC CTGGGGTGGA TCGGGTCTAT ATGGGTGGGC CTGTCTCACC GGAGCAGGGG
TTTGTGCTGT TTGAACAAGC CTTGGATCTG CCAGGGATTA TGATGTTACC CGACGACCTC
TATATGGGCA CCAACCCCGA CATTATACGA CTTATGGGAC GTGCAGGGGC TCAAGAGCGT
TTTTTATTCG CATTGGGTTA TGCTGGTTGG GAGGCGGGGC AACTGGAACA TGAGTTGCAG
GAAAATAGCT GGTTGGTATG CGATGCGCAG CGTAGTATTT TGTTTGATAT GGGTTATGCC
CAGCGCTGGG AAGCCGCCAT CCGCAGCATG GGTATCGACC CTGCTTTGTT GGTGGATGCC
AGTCACGGTT TTGCGAATTA A
 
Protein sequence
MKFATLAGKF LIAVPSLADP FFERTVLYLC AHNEDGALGL VINQPLDTTM SQMAGYLELD 
WQRPGVDRVY MGGPVSPEQG FVLFEQALDL PGIMMLPDDL YMGTNPDIIR LMGRAGAQER
FLFALGYAGW EAGQLEHELQ ENSWLVCDAQ RSILFDMGYA QRWEAAIRSM GIDPALLVDA
SHGFAN