| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0624 |
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| Symbol | |
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| ID | 4481917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 755324 |
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| End bp | 757750 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639721367 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_864551 |
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| Protein GI | 117923934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTG GTGGGGTTGG GCTGCTGGTG TGGTTGCTGC CTCTGCCCCT GTGGTCGGCT
GTGCCGGACG CCGCTCTGGA GCAGAGTCCA GTCACCGTCG AAAAGCGTGC TGTGCCCACG
CCACGGCAGG TAGAGAATCT GCCGCAGCCT GCCGTGGGCC AACCAGCCCA CTCCGTACAG
GCTCCTCTTG AGATCAAACC GCTGGCTGCG GTGGCCCCGC CCCCTAAACC GCTGGTGGCG
CTCCCGCCAT CCTCCAAGCC CACTGCGGGG GTGGCTTCCG CGATCCCAGT ACGGCCCCCC
CTGCCACACG CCAACGATCT ACAAAAGCAG GCTGTAACCT CCAATAGCCG GGCTACGCCC
ATGCCAAAAA GACGGCAGTC CTGGCTTAAA TTACCCGTAG AACAGCGCTT TAAAAAACGG
TTCGAGGCTC TGCTTAAACC CAAGTTGCCC ACAGAACTGT TTGAGGATAA CTTCTGGGCC
GAGGATGATT TTTTAGCCTC TTACGTGGCT TGGGAGCTGC TGTTTCATCC GGATTATCAC
GCCACGGTCC CCCGCCTACA AGCGTTTCTG CAAAAATGGC CGGAACACCC CATGGCCGAT
CGGGTTGAGG CGTTGATGGA TCAGCGCATG GTGGGTCATA AAGATGATCA AACGGTGCTG
GCATGGTTTG CTAAACGTAC CATTAAATCG GTAAAAACCT CACAGCGGCT TCGCTACCTG
GAGGCCTTGC TGCATGAAAA AATGACCGAG CAAGCCTACC CCGTGTGGCG CCAGCTCTAT
CGCGAAGGGG CCAATCTGGA AATAAAGGGC GCAAATGCAG AAAGTTGGCG CTTTAATAAG
CGCTTACAGC AGTCAGACCA TGAAGCACGG GCGCGGGCTC TCATCCAGAA AAAACAGGTC
AAAGAGTTTG ATCGCTTGCT GGCGGATTTT CCGAAGGAGC AGGCCAACTA TTTTCGGGCG
CTGGCATCGG CCACCTATGG GCGCAGTGAT TTTGACAAAC GCTATGGGGT GCTGGATGCC
AAACAAAAGG TGGATGCGGA TCTGTGGGAG GCACGTATTA ACGGCTTGTG GCGGCTCCGC
CACTACACCG ACGCGATCCA GTTGTTAATG GGGGTCGAAT GGGCCTATCT GGGGGATCAA
CAGCGTCGTC TTATGCGTTA TAAATTTGGC AAAGAGCTGT TATATAGCCG GGATGAGGTG
GCTCAGGCGC ATCGGCTGTT GCAAGCCAAT GCAGCCAGTG GTGCAGAAGG GTTAGACGAC
TCTACCTGGA TGGCCGGATG GAGTGCCCTG AAGCTGGGTA AACAAGGGGT TGCGCTTGAG
GATTTTCGCC GTTTAGGTCG TTATGCCAAG GATCGTGACC GCGCCAGCCA AGGGGCCTAT
TGGAGCGCCA AATTGCTGGA GAGTGAGGGT AAACCTTATA AAAAATGGTT GCAGCGGGCG
GCGAAACATC CCGACACTTT TTACGGCTTA CTGGCCATTG AGCGGCTACA AGGTGAACTA
ACCCCGGCAG CCATTGGGGG GCGTGCCTTA GCGTGCGATG ATCTGCCCTT TACGGATACC
CGGTTGGCCG AAGCCCGGCA ACGCATGGCA AAATTGGTCG AGATGGATCG TGCCTACTAT
GTGGGTGGCG AGGTGCAGCG GGCGGCACGC AAGCTCAAGC TTAATGCATT ACAACAGATC
TGTCTGGCCG AGGCGTATCA AGATCCCTAT TATGTCCTGC GAACCGCCTC GGCTTTGCGC
AATCAGGGGG GGGGGCGGCT GTGGCGGGGG CTCTATCCAG AACCCAGTGG CTGGGAGCCT
TCGACGGGTT GGTCGTTGCA TCCCGCCGCC GTGTGGGGCA CGGTACGGCA GGAGAGCCTG
TTTAACCACC GTATTCAATC CTCAGCAGGG GCCATGGGTA TGATGCAGCT CATGCCGGCT
ACCGCCAGAG GCGAGGCGCG TATTCTTAAT CTGCCTCGGG CAACCTCCTT AAAACTGTTG
CGCCCGGAGT ATAACCTTTC CTTGGGGCAA TCCTACCTAC AGCGTATGTT AAATAACCAT
GAGGGGGATA TGACCCTGGC TTTGATCTCC TATAATGCCG GACCAAACCG GGCTAATTTA
TGGAAGGTGA ACCGGGATAA AATGGATGAC TTGACCTTTA TTGAGAATAT CCCCTTTTCT
GAAACCCGTC ACTATGTCAA ACGGGTTACC CATGGACAGG CGATCTATCT GCTACGTTAT
CAGGGTAAGG CTTCATTAAA GGCGTGGATT CAACCCCATG GGCCTGGGCT TGAACGGCTG
CAACCGCCGA AAAACTGGCA GGGGGTAAAA TCTCGTTTGG TGGAGGCTGA GGGGGCTTTG
CAAGCCACTG CGCGGAGACC GCCCCCACGC GCTGTGCTGC AAAGTTTTTA TGACCCTATG
GGGCAGACCG AGGAGAGGTT TCAATAG
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| Protein sequence | MRVGGVGLLV WLLPLPLWSA VPDAALEQSP VTVEKRAVPT PRQVENLPQP AVGQPAHSVQ
APLEIKPLAA VAPPPKPLVA LPPSSKPTAG VASAIPVRPP LPHANDLQKQ AVTSNSRATP
MPKRRQSWLK LPVEQRFKKR FEALLKPKLP TELFEDNFWA EDDFLASYVA WELLFHPDYH
ATVPRLQAFL QKWPEHPMAD RVEALMDQRM VGHKDDQTVL AWFAKRTIKS VKTSQRLRYL
EALLHEKMTE QAYPVWRQLY REGANLEIKG ANAESWRFNK RLQQSDHEAR ARALIQKKQV
KEFDRLLADF PKEQANYFRA LASATYGRSD FDKRYGVLDA KQKVDADLWE ARINGLWRLR
HYTDAIQLLM GVEWAYLGDQ QRRLMRYKFG KELLYSRDEV AQAHRLLQAN AASGAEGLDD
STWMAGWSAL KLGKQGVALE DFRRLGRYAK DRDRASQGAY WSAKLLESEG KPYKKWLQRA
AKHPDTFYGL LAIERLQGEL TPAAIGGRAL ACDDLPFTDT RLAEARQRMA KLVEMDRAYY
VGGEVQRAAR KLKLNALQQI CLAEAYQDPY YVLRTASALR NQGGGRLWRG LYPEPSGWEP
STGWSLHPAA VWGTVRQESL FNHRIQSSAG AMGMMQLMPA TARGEARILN LPRATSLKLL
RPEYNLSLGQ SYLQRMLNNH EGDMTLALIS YNAGPNRANL WKVNRDKMDD LTFIENIPFS
ETRHYVKRVT HGQAIYLLRY QGKASLKAWI QPHGPGLERL QPPKNWQGVK SRLVEAEGAL
QATARRPPPR AVLQSFYDPM GQTEERFQ
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