Gene Mmc1_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0538 
Symbol 
ID4481442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp645902 
End bp647140 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content58% 
IMG OID639721285 
Producthypothetical protein 
Protein accessionYP_864469 
Protein GI117923852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT TTTCCTCAAT GATCCCCCAA CTCACCGGCA TGACCGCTGC CACGGTCCTA 
GGGTGGGTGA TTGGCAGCCC CCCAGCTTGG GCCGATGACG CGCCGCGTAG CGAGTGGTCT
GGTTATATGG CTGGGGAGCT GCGCCTTTTC CCCGAAGCCC CGTTGCGGGG TGGGCAGGTG
GTGCTCTACC CCGCGCTTAG CGCTCAGGGG GAGTATTTTC GCGCGTGGGA TCAAGGCCAT
AAGCAGCTCC GTTTTACCCC TTTTGTGCGC CTGGATGCCC AGGATCATGC GCGTAGCCAT
GTGGACCTGC GGGAGCTGGC CGTCACCCAT TTAGATGATG CCAACTGGGA AGTGAGTGTG
GGGTTGCGCA AACTCTATTG GGGGGTTACA GAGTCCCGTC ATCTGGTGGA CATCCTCAAC
CAGACCGATG CGGTAGAGGG CATTGATGGT GAAGATAAGC TAGGGCAGCC CATGCTCTCT
GCCGGCTTTT TTCAGGATTG GGGTACCCTA AACCTCTACT GGATGCCCTA TTTCCGGGAG
CGCACCCTGC CCGGTTGGCA GGGGCGCCCA GGCTATTTTT ACCGGGTTCG TCAGAACGAG
GCCAGTTATG AATCCCCGGC GCAGGCGTGG CATCAGGATT TTGCGGTACG CTACAGCCAC
ACCGTGGATA TGTGGGATTT CTCCCTCAGC CATTTTTCCG GAACCGCCCG CGAACCTCAA
CTGCGCAGTA AAACCGAAGC CAGCGGTGCG CTGGTACTCT ACCCCTATTA CTACCAGCTT
GAGCAGACCG GGTTAACGGT GCAGGCCACC ACCGACGCTT GGTTATGGAA GTTTGAAGGG
GTAACGCGCC ATGATCTGCA AGGGCGCAGC CTGGCAGCGG TTGGGGGGTT TGAGTATACT
TTTGTCGGTA TTTTGGAGAG TGATGCCGAT CTGGGGCTGA TCAGCGAATA TATGTGGGAA
GAGCAGGGCA ACAACAGCCT TTCGCCCTTT CAGAATGATC TGATGGTGGG GGGGCGTGTT
ACCCTCAATG ACACCCAATC CACCGAGTTT TTGGCCGGTG CCATCGCCGA TTTAGAGAGC
CACGCCCTCT ACCTGAGTGT CGAGGCCAGC CGTCGCTTAG GCGAGCAGTG GAAGCTCTCG
CTGGATGGCT GGAGCAACCT TAACCTCAAG AGCAGCGACC CCCTCTACAG CCGCCGTCGG
GATAGCATGC TCCAGTTGGA GCTGGCCCGC TACTTTTAA
 
Protein sequence
MKLFSSMIPQ LTGMTAATVL GWVIGSPPAW ADDAPRSEWS GYMAGELRLF PEAPLRGGQV 
VLYPALSAQG EYFRAWDQGH KQLRFTPFVR LDAQDHARSH VDLRELAVTH LDDANWEVSV
GLRKLYWGVT ESRHLVDILN QTDAVEGIDG EDKLGQPMLS AGFFQDWGTL NLYWMPYFRE
RTLPGWQGRP GYFYRVRQNE ASYESPAQAW HQDFAVRYSH TVDMWDFSLS HFSGTAREPQ
LRSKTEASGA LVLYPYYYQL EQTGLTVQAT TDAWLWKFEG VTRHDLQGRS LAAVGGFEYT
FVGILESDAD LGLISEYMWE EQGNNSLSPF QNDLMVGGRV TLNDTQSTEF LAGAIADLES
HALYLSVEAS RRLGEQWKLS LDGWSNLNLK SSDPLYSRRR DSMLQLELAR YF