| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0449 |
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| Symbol | |
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| ID | 4484012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 541092 |
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| End bp | 542015 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639721196 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_864380 |
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| Protein GI | 117923763 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00010985 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTT CCGATACACG TCTACGGGTT TTCTATGCCG TTGCCAAACA TCTCTCCTTT
ACCCGTGCGG CAGAGGAGCT CTATTTGACC CAACCCGCGG TCACGTTTCA AATACGGCAA
CTCGAAGAGC ATTTTGATAC CCGCCTGTTC GACCGCCACC ATAACCGTAT CTCGCTGACC
GAGGCCGGTC TTGAGGTGTA TAGCTACGCC GAGCGCATTT TGGATCTCTA CCGCGAAACC
GAAAAAGCCG TCAGCGAACT CACCGGTGTC ACCCGGGGCG TGGTCAAAGT GGGGGCTTCA
ACCACCATTG GGGAGTATCT GCTGCCCCGT ATCCTCAGTG ATTATCGCGA CCAGTTCAAC
GATGTGCAAA TTCGGCTCTC CATTGATAAC ACCCGCACGG TGGTGCGCAA ACTCGAAGAT
GCCACCATTG ATGTGGGTAT GATCGAAGGC CCCGTCAAAA ATAAAAATAT CGCCCGCGAT
GGCTGTCTGG ATGACGAGTT GGTGGTCATC CTGCCCCCCA ACCATCCGCT GTGCGACCTG
GACGAAATCC CTGTCAAGGA GCTCAAGGCC TACCCCTTCG TCAGCCGCGA AGAGGGCTCC
GGTACCCGCC AAGTGGTACA CGACCATCTG CTCCATGCCG GGCTGCCCTA TGATCAATTG
GATATTGTAT TGGAGTTGGG CTCAACCGAG GCCGTCAAGG GCTCCGTTGA AGGGGGCATT
GGTATTGGTA TCGTCTCCAG CGCCTCGCTT ATCAAAGAGC TCAAATTGGG TATTTTAGTC
GCCAAACGGG TGCAAGGCAT GCGCATTACC CGTACCATTA ACTTTATTCA CCAAAAACAG
AAGTTTCGCT CTAAAGCGGT GGAAGCCTTC ATCAACTTTG CCAAAGATCA CTGCAAACAT
ATGGTCTCGC CCATTGATGA ATAA
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| Protein sequence | MSFSDTRLRV FYAVAKHLSF TRAAEELYLT QPAVTFQIRQ LEEHFDTRLF DRHHNRISLT
EAGLEVYSYA ERILDLYRET EKAVSELTGV TRGVVKVGAS TTIGEYLLPR ILSDYRDQFN
DVQIRLSIDN TRTVVRKLED ATIDVGMIEG PVKNKNIARD GCLDDELVVI LPPNHPLCDL
DEIPVKELKA YPFVSREEGS GTRQVVHDHL LHAGLPYDQL DIVLELGSTE AVKGSVEGGI
GIGIVSSASL IKELKLGILV AKRVQGMRIT RTINFIHQKQ KFRSKAVEAF INFAKDHCKH
MVSPIDE
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