Gene Mmc1_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0440 
Symbol 
ID4484003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp528050 
End bp528355 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content51% 
IMG OID639721187 
Productanti-sigma-factor antagonist 
Protein accessionYP_864371 
Protein GI117923754 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0996499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA TCAAAAAGCA GTTCGACGAA GCCGGCAACC TAACCATTAT ACAACTGCCC 
GAAACCTTCA CCTTTCGGCT GTTTAATGAG TTTCGGGGGT GCTATGAGGC GTTGGATCGC
CAAGGCTCCG TTGAGGTTGA TCTTTGCCAT GTCACCCACT TGGATAGTTC GGCGTTGGGC
ATGTTGGTCG CAGTGTGGGA ACACATGGGC CGTAACCGCG AGCAGGTGCG CTTGAGCAAC
ACCTCTATCG CCGTGCGTAA GATCCTTATG GATGCCAACT TTAATCAGTT GTTCACTATC
TCTTAA
 
Protein sequence
MDLIKKQFDE AGNLTIIQLP ETFTFRLFNE FRGCYEALDR QGSVEVDLCH VTHLDSSALG 
MLVAVWEHMG RNREQVRLSN TSIAVRKILM DANFNQLFTI S