| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0408 |
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| Symbol | |
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| ID | 4480892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 482389 |
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| End bp | 484818 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639721156 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_864340 |
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| Protein GI | 117923723 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTG GGGGGTGGAA CTTTCACGCT CTTCGCTTTT TCCGCCCATC GCACATGGGG
GGCAAGCCGA AGCGCGGTGA AGATCCAAGA GGGGATATCC GCATGGCGGT TAGACGATCC
AAGGTGATGG TGCCACTGCT GGGGGGGTTT GTTGTGCTGC TCACGGTCAT GGTTGGCATG
TGGGGGTACA ACTATAAAAC ATCAGAAGCG TTGATTGGCA CCCTACAAGG CAGCATGACC
ACCGTGCATA AAATGCACAT TATCTCAGAA TTAATGGAGG TTATTCGCGC CCGCACCCGT
ATAGCCGCGG TTATGCTGGA TGAAAACGAT GTGTTTGAAA ATGACCGTCG TAAAATGGAG
CTGGATGGAC TGGCCAACCG CTTTATCACC CTGCGCAGTG AGCTGCTTAA ACTCCCCCTT
GATCAGGTCG AAAAGAGAAT CCTCCACGAT CTAAGCACCA ACGTCATCCC TACCACAGTC
AAAAGCCTAC AGGAGGTCAT TGAAGTCGCC CTATGGGTCG AAGATAGCGC GCTGCGGGAC
GCCGCTCGGC GCAAGCTGTT TAATACCGTG CAACCCGGCC AAGGTCAAGT CATTGACCAT
TTTATGCAGT TTCAAACCCA TCTAGAGACC CAAATCACCC AAGCCACCGC GGTTACCATC
AGCTCCTACC GCACCAATCT ACACAGCCAA CTGCTGGTAT TGCTGCTGGT ATTGCTGGTT
GTCTTGCTGA CCAGCTACAT CACCATGCGC CGGGTAATGG GCATCGAAAG CACCCTTCAT
TATGAAAAGG AACGGGCTCA AATCACGCTC ATTTCGATTG CTGATGGGGT TATCACCACC
GATACCGAAG GCTACATTCA GGACGCCAAC AAGGTGGTTG GCGCCCTGCT GGGGCATAAG
CCAGCGTCAC TCATCGGCAA ACAGTTGGAA CAGGTTTTTC CCACCCGCGC CCGTGATGAG
GAGAGCCCCC CCTTACATGA GGATCTGAAA ACCCTGTTGA GCAGTGCCAC CCCCCAATCC
ATGAACACCA TGGTGGTTCT GGAAAGCGAC GGCGATGATC TGCTGCTGGA CGCGACCCTA
TCCCCTGTAC AAAGCAGCGA AGGGGTGGTG TTGGGGGCCA TTATTACGGT TAAGGATGTG
ACTGAGCAGC AACGCATGTC CGAAAAGATT CGCTATCAAG CCCGTCACGA CCATCTCACC
GGTTTATATA ATCGCCACGC CTTTGCCGAC CTCTGCCGCG AGAGCATGGA GGCCATGAAG
GCCGATGAAG TACACTGCCT TTGTGTCATC GACCTAGACC GCTTTAAAGC GATCAACGAT
ACCTGTGGTC ACAAAGCCGG GGATATGGCG TTAAAACAGA TTTCCACCAT GATCCAAGGA
TGTGTGCGTA AATATGACTA CGCCGCACGC ATCGGCGGCG ATGAATTTAC CATTTTTTTG
GCCGACTGTA GCCAAGCCGA CGGGGTCAAG GTGATGGAAA AGCTGTTGGA ACAGGTGCAA
GATTATCGCT TTTTGTGGGA GGGGCAACAA TTTAACCTGG GTTTTTCCAT CGGCATCTGC
GAGATCCACT TTCAAGTGCC CTTTGAAAAA AGCTTTCAAG CCGCGGATGC GGCGGTTTTC
CAAGCTAAGG ATGATGGCCG CATGTGCATC CGCACCCGTA CCGTTGAGAG CAACCTTCTT
GAAACACCCA CCAAGGAAGA GACCAACTGG GTTGGCCGCC TCCACCGGGT GTTGGGGGTA
GAGCCGTTGG CCTTGGTGGC ACAGCGCATG GTACCCTCAC CCTCCATGCA GGACCATCCA
CCCCTCTACG AAATTTTTAT GCGCCTACCC GATGGCGAGA AGCACCATCC ACCCAACGCC
TTTTTGCCCA CCGCTGAGCG CCATGGATTA ACCGGGGATC TGGATTATAA AGTGCTGAAA
ATGGCCTTAG ATAATCTTTT ATTACATAGC GATGGGCGCA TTTACAGCAT CAATTTATCG
GCCAAAACGC TGGAGGATAA AGCGAGCAGT GCCGCCCTAC TGGCGCTACT TGCCGCGCAC
CCCAAACGGG CCAAACAGAT CTGTTTTGAG ATTGATGAGA ATACCCTCAT CAACAATATG
GAGGTATGCA GCCAATTTTT GTTTGAGGTC AAGCAGCACG GGGCTGTGAC CGCCTTGGAC
AACTATGGGG GCTCCTTGGG CAACTGTCTC TATCTGGAAC AGCTGGGGCT GGATATCTTA
AAGGTGGATG GGCAGTTGGT GCAGCAGGCC AAAAACAAGC TGAGCACCCG CACGGTGGTT
TCGTCCATCC ACAATATCTC TCACTCGATG AACATTTTAA CCGTCGCCAA ACATGTCGAA
GATGCAGAGC TTGCCGCGCA GTTGCTTACC ATAGGTTTCG ACTTTCAGCA GGGGTTTTAT
TACGCCAAGC CGGAACCGCT CATGGTGTAA
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| Protein sequence | MIIGGWNFHA LRFFRPSHMG GKPKRGEDPR GDIRMAVRRS KVMVPLLGGF VVLLTVMVGM
WGYNYKTSEA LIGTLQGSMT TVHKMHIISE LMEVIRARTR IAAVMLDEND VFENDRRKME
LDGLANRFIT LRSELLKLPL DQVEKRILHD LSTNVIPTTV KSLQEVIEVA LWVEDSALRD
AARRKLFNTV QPGQGQVIDH FMQFQTHLET QITQATAVTI SSYRTNLHSQ LLVLLLVLLV
VLLTSYITMR RVMGIESTLH YEKERAQITL ISIADGVITT DTEGYIQDAN KVVGALLGHK
PASLIGKQLE QVFPTRARDE ESPPLHEDLK TLLSSATPQS MNTMVVLESD GDDLLLDATL
SPVQSSEGVV LGAIITVKDV TEQQRMSEKI RYQARHDHLT GLYNRHAFAD LCRESMEAMK
ADEVHCLCVI DLDRFKAIND TCGHKAGDMA LKQISTMIQG CVRKYDYAAR IGGDEFTIFL
ADCSQADGVK VMEKLLEQVQ DYRFLWEGQQ FNLGFSIGIC EIHFQVPFEK SFQAADAAVF
QAKDDGRMCI RTRTVESNLL ETPTKEETNW VGRLHRVLGV EPLALVAQRM VPSPSMQDHP
PLYEIFMRLP DGEKHHPPNA FLPTAERHGL TGDLDYKVLK MALDNLLLHS DGRIYSINLS
AKTLEDKASS AALLALLAAH PKRAKQICFE IDENTLINNM EVCSQFLFEV KQHGAVTALD
NYGGSLGNCL YLEQLGLDIL KVDGQLVQQA KNKLSTRTVV SSIHNISHSM NILTVAKHVE
DAELAAQLLT IGFDFQQGFY YAKPEPLMV
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