Gene Mmc1_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0398 
Symbol 
ID4482142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp467058 
End bp468056 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content57% 
IMG OID639721146 
Producthypothetical protein 
Protein accessionYP_864330 
Protein GI117923713 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCAC GGGTTGCCGA ACATATCTAT TGGCTGGGCC GCTACATGGA GCGGGCCGAG 
GATACAGCAC GCCTAATCAT GGCCACCAGC GGCGCCACGC TGGAGTTGAT GTCCGTACCC
GGTCATCAAC CGGTGGACTG GGAGCAACTA CTGCTCATCG TTGGGGTCTT GCCCAACTAT
AATGAGCACC ACCACACCTA TGAAGAGCGG GAGATCGTGC ATTTTTTGCT CGCCTCTGAA
CGCAACCCCT GCTCGATCTA CAATGCCATG CGCATGGCCC GTGAAAATTT GCGCATTACC
CGTGACGCCT TTCCCCGCGA AACGTGGTCA CAGATCAACG GCTTGCGGCG GCGGGTTGAG
CATATTCCCG ATTTTGCCCT CTATGGTTCG GGTCGGCAAG ATCTGCTGGA GGGCATTATT
GGTAGCTGTT TGCAGATGTC CGGCCTGCTT ATCTCCACCA TGAGCCGGGA TGAAGCCTAT
CAGATGTTTC GTCTGGGACA GCTGCTTGAA CGGGCTGATA TGACCACCCG CATTTTGGAT
GTGCAAGGGG CTGGCGTGTT GGGTGGGGAT AGTGACGCCG AACTCTCTAT GGAACATGCG
GTGTGGACCA CGGTGTTACG CTCGCTCTCG GGCGACCAGA TGTACCGCAA GCAGGTTGAG
CCTCGGGTGC GGGGTCGCCA GACCCTCGCC TTTGTACTCA AAGATAAACA GTTCCCCCGC
GCCTTTTACT ACTGCCTAAA CGGGGTAAGA GACCGCTTGG TCAAATTGGG GCGCGCCGAA
GCCGCCCAGG GTATCCTAGG GGAGTTAGAA AAGTCTCTCT ATTTAGCCGA TTTGGATACC
CTCGCAAAAC AGGGACTGCA TGAGTTTTTG GATGGTTTGC AGGTCCAGTT GGGGTCGTTG
CATGAAGCGG TGGTTGATAC CTACTTCCGC TTTCGGCAGG AAGAGACACC CCCAGCCGCT
CCGGCCAGCC AAACCCAGAG CCAAGAACAA CGGGCTTAG
 
Protein sequence
MLSRVAEHIY WLGRYMERAE DTARLIMATS GATLELMSVP GHQPVDWEQL LLIVGVLPNY 
NEHHHTYEER EIVHFLLASE RNPCSIYNAM RMARENLRIT RDAFPRETWS QINGLRRRVE
HIPDFALYGS GRQDLLEGII GSCLQMSGLL ISTMSRDEAY QMFRLGQLLE RADMTTRILD
VQGAGVLGGD SDAELSMEHA VWTTVLRSLS GDQMYRKQVE PRVRGRQTLA FVLKDKQFPR
AFYYCLNGVR DRLVKLGRAE AAQGILGELE KSLYLADLDT LAKQGLHEFL DGLQVQLGSL
HEAVVDTYFR FRQEETPPAA PASQTQSQEQ RA