Gene Mmc1_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0268 
Symbol 
ID4482321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp304966 
End bp305277 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content55% 
IMG OID639721017 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_864201 
Protein GI117923584 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG CTGCACTACC GCAACTGCCT AACATTGCCC AACTCAGTAA GGGCATGAGT 
TTGAGTAGCA CCAAAGCGGG GGGGCCGTGG GAGTCGTTTT CCACCCTGCT TTCCCAGCAG
ATTAAAGAGA CCCAGCAGCT GGAGAAGAAG GCGCGCGTAT TGGGTGAAAA GGCGATGCTC
GGTAATGCCG GGGTAAGCCT GCATGAGGCG CAGATTGCGG GGGCGACCGC CGAGCTGCAT
ATGCAGCTGT TGGTGCAGAC CCGTAACAAG GCGGTTGAGG TTTATAAAGA GGTTATGAAC
ATGCCGGTCT AA
 
Protein sequence
MKIAALPQLP NIAQLSKGMS LSSTKAGGPW ESFSTLLSQQ IKETQQLEKK ARVLGEKAML 
GNAGVSLHEA QIAGATAELH MQLLVQTRNK AVEVYKEVMN MPV