Gene Mmc1_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0212 
Symbol 
ID4483458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp235613 
End bp236113 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID639720957 
Producthypothetical protein 
Protein accessionYP_864145 
Protein GI117923528 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AAATCGTTAT AGCATTAGCA GCGGCGGCAA TCCTGGCGCA AACGCCTGTT 
TACGCAGGAG AAGAGGCTGC CGTTGTACCC TTGAAAAAAA TGACCTTAAA AACCGCCTCC
ACCATCGCCC ACAAGGTGAT TGAGGCGTGC CGTCTTAAAG GTGTGCAGAT TGGGGTTACG
GTGATGGACC GGGATGGCAT TCCCCAAGCG ATTTTGCGGG ATACCGTTGC CCCCCCCATT
ACCCTGACCA TCTCCAAAGG CAAAGCCTAT GCCGCCGCCA TGTTCCGTGT GCCCAGTTCT
CAGTTGAGCC AACGCGCCCA GAGCCCCATT GGTCGGGTGC CCGGGGTAGT GATGTCGGCG
GGGGCCATTC CGCTGGAGGT CGGCGGGATC TTTTTGGGGA GTGTTGGGGT ATCGGGCGCC
CCCTCTGGCG AGACCGACGA AGCATGTGCC AAAGAGGGTG CCCAAGGGGT GCTGGATGAG
CTAGAGATGT CCATGATGTA A
 
Protein sequence
MKKQIVIALA AAAILAQTPV YAGEEAAVVP LKKMTLKTAS TIAHKVIEAC RLKGVQIGVT 
VMDRDGIPQA ILRDTVAPPI TLTISKGKAY AAAMFRVPSS QLSQRAQSPI GRVPGVVMSA
GAIPLEVGGI FLGSVGVSGA PSGETDEACA KEGAQGVLDE LEMSMM