Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0116 |
Symbol | |
ID | 4482211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 118832 |
End bp | 120241 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639720861 |
Product | hypothetical protein |
Protein accession | YP_864049 |
Protein GI | 117923432 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTCA ATCGACCTCT GCCATTTATC AGCGCCTTTG TTGAAGAGAT TGATGGAGCC CTGCGGGAGC AGCATACGCA TTCGGTTGGG ATGAGCGTCT GCCAGCGGAG CTGGTTTGGT TTCTGCATCA TGGCGATCAT GCTGACCAAC TCGATCTGCT GGGCACAGTT TGAGCGGGCT GGGTTGGGAC GCTACGGCCT CGGGGCACTG GCTTGGATGT TTCGGAGTTC CAAGATTCCC TGGGAGCGGC TGTTTCAGAT GAGCGTTCGG GTTGTTTTGC GTCGCCATGG GATCACGCAT GGTGTGCTGG TGGTCGATGA CACGGACAAA AGGCGGGCCA AGGTCACGAC CCGCATCTCA CATGTCCACA AGATGAGGGA CAAGAGCAGC GGCGGTTATC TTTTTGGCCA GCAAATTGTC TTTTTGCTTT TGGTGGCCGA CATGGTGACG ATTCCGGTCG GGTTTGCGTT TTATCGTCCA GACCCGGCAC GGACGGTTTG GCGCAAGGAA GTCAAAGCGC AGAAGCGCAA AGGGATTCTG AAAAGCAAGC GCCCAGTTGA ACCGGCCAGG AACCCGGACT ATCCGACAAA ACCAGAATTG GCACTGCGAT TGTTGCGGCA GTTCAAGCAG TGGCATGCTG TGGTGCAGGT CAAGGCGATC CTGGCTGATG CACTTTATGG AGCTGCTGAT TTTGTAGACC AAGGGTCATC CCTGTATGCT GGCATCCAAT GCGTCAGTCA GTTGAGGAAG AACCAGAAGG TCCGTTTCCT GAGCCGGGAT CTGACTGTTG AGGAATTTTT CCAGCGCTAT CCCGGTGTAA CGGGGAGGCT CCCGGTCCGA GGTGGAGAGA ACAGGGCCAT CGTGTTTCGC AGCGCCCGCA TCCATGTGAA AGCACATGGC GTGAAGCGCT TTGTTATTGC ATTGAAATAT GACGGAGAAC AAGATTATCG ATACCTGTTT GCCTCCGACT TGACGTGGCG AACGGAAGAT ATCCTGAAGG TGTTCACCTT GAGGTGGCTG ATCGAGGTGT TTTTCCAGGA CTGGAAGGCC CACGAGGGCT GGGGGAATCT GACCAAGCTT CAAGGTGACG AAGGATCAAG CCAAGGCCTG ATCCTGAGCC TGATGGTTGA TCATTGTCTC CTGGTCCAAC CAGACCAACT GGCCCAGTTG AAACACAAAC AACCCGCGTT CACTGTGGGA AGCCTGATCA ATCACATCAA GGCCGACAAC CTAGTGGCAC TCATTCACGA TCTATTGAAC GCAAATGCAC CAGAGCAGGA ATTGACCCAA TTGGCCGACG TACTGGCTAA ACAGTTCAGG CTGAACCTCT CGGAAAAACA CATGGTTGGG CGTGATCTGG GGCGGCAGGC CCCATCAGCG TCGCTCAAGT ATAAAACTGC GTTGGCGTGA
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Protein sequence | MIFNRPLPFI SAFVEEIDGA LREQHTHSVG MSVCQRSWFG FCIMAIMLTN SICWAQFERA GLGRYGLGAL AWMFRSSKIP WERLFQMSVR VVLRRHGITH GVLVVDDTDK RRAKVTTRIS HVHKMRDKSS GGYLFGQQIV FLLLVADMVT IPVGFAFYRP DPARTVWRKE VKAQKRKGIL KSKRPVEPAR NPDYPTKPEL ALRLLRQFKQ WHAVVQVKAI LADALYGAAD FVDQGSSLYA GIQCVSQLRK NQKVRFLSRD LTVEEFFQRY PGVTGRLPVR GGENRAIVFR SARIHVKAHG VKRFVIALKY DGEQDYRYLF ASDLTWRTED ILKVFTLRWL IEVFFQDWKA HEGWGNLTKL QGDEGSSQGL ILSLMVDHCL LVQPDQLAQL KHKQPAFTVG SLINHIKADN LVALIHDLLN ANAPEQELTQ LADVLAKQFR LNLSEKHMVG RDLGRQAPSA SLKYKTALA
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