Gene Mmc1_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0107 
Symbol 
ID4482202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp111585 
End bp112298 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID639720854 
Producthypothetical protein 
Protein accessionYP_864042 
Protein GI117923425 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA CCCCAACCAT CACACTCTGT CTACTCACCT TCAATGAGTT GGAGGGGTGT 
CGGCATGACC TGCCCCATCT GCCGCTGGAC CACTTTGATG CAGTCTATGC CCTGGACGGT
GGGTCCCGCG ATGGCACCGA TACCTTTTTG CGGGAGCAAG GCATCACCGT ACACACCCAG
CAAAAGGCGG GCTATAACGC GGCCTATCTG GAGGCGTTTG CCCATTGCCA AACCGATGTG
CTGGTGCTGT TCCACCCCAA GGGCTGCATT GATCCCCAAT CGGTTTTAAA CTTTAAACCC
CTGTTTCAGG CGGGCAACGA TCTGGTCATT GCCAGCCGTT TAGGGCCGGG GGCCCATAAT
GAGGAGGATG AGCAGTTGCT CAAACCCCGC AAATGGTTTG TGCAGGGTAT CTCGATCCTC
GCGGCGCTGC TCTGGCGCCG GGACCGGGGT CCCCACTTAT GGGATGTACT GCACGGCATG
CGCGGCATGC GGGTGGCGGC TTTTCATGCC ATTGCCCCCC GTGATCATGG TCTCTCCATT
GATCTAGAGA TGGTGGTGCG CAGCTACCGC CTTAAGCTTA AACGGGCCGC GTTCCCCGTG
CATGAGCGCA CCCGTCTGGC CGGTCAAACC CACTTTAAAG CGCTGCCCAC CGGTTGGAAG
CTGCTTAAAT ATATGGCCAG TGAGCTGTGC CGTCCCAAAA CCGAGCCCCG CTAA
 
Protein sequence
MNATPTITLC LLTFNELEGC RHDLPHLPLD HFDAVYALDG GSRDGTDTFL REQGITVHTQ 
QKAGYNAAYL EAFAHCQTDV LVLFHPKGCI DPQSVLNFKP LFQAGNDLVI ASRLGPGAHN
EEDEQLLKPR KWFVQGISIL AALLWRRDRG PHLWDVLHGM RGMRVAAFHA IAPRDHGLSI
DLEMVVRSYR LKLKRAAFPV HERTRLAGQT HFKALPTGWK LLKYMASELC RPKTEPR