Gene Mmc1_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0104 
Symbol 
ID4481105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp108831 
End bp109379 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content56% 
IMG OID639720851 
Productphosphoribosyltransferase 
Protein accessionYP_864039 
Protein GI117923422 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA TCCTTGAAAA TACACTTATG ACACCGGATC AAATTCACCA GGCCATCACG 
GAGCTGGCGG AGACTATCCT CCCATCCATC AGCGATCCAA CGCAATGGTG CGTGGTGGGT
ATTCGCCGGG GCGGCGCTGT GATTGCACAG CAGCTGCGCG ACTCGCTGAG CGCAAGCTTG
CAGGTTAAGC TGCCCATCGG TTTTCTGGAT ATTACTTTCT ATCGGGATGA CCTAAGCACC
ATTGGCCCCC ACCCCACCGT GGGCGCTACC GATCTGGGGC TGCTGGATGT GGAGCATGCA
CGGGTGATTT TGGTCGATGA TATTCTCTAC TCCGGTCGCA CCGTGCGGGC TGGATTGGAC
GCGCTGTTTG CCTTTGGTCG CCCAGAGTTG GTTAAGTTAG CCGTGTTGGT GGATCGTGGA
CACCGTCAAT TGCCCATTCA ACCCGACTTT TGTGCCAGAC AGGTCCCCAC CGAGCTGCAT
GATAACTTGA AAGTGGTCAC CCATGCAGAT CAGCGCCTGA GCTTGGTCCA TACACGCGCC
TTACCATGA
 
Protein sequence
MNAILENTLM TPDQIHQAIT ELAETILPSI SDPTQWCVVG IRRGGAVIAQ QLRDSLSASL 
QVKLPIGFLD ITFYRDDLST IGPHPTVGAT DLGLLDVEHA RVILVDDILY SGRTVRAGLD
ALFAFGRPEL VKLAVLVDRG HRQLPIQPDF CARQVPTELH DNLKVVTHAD QRLSLVHTRA
LP