| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0024 |
|---|
| Symbol | |
|---|
| ID | 4480710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 25568 |
|---|
| End bp | 26701 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639720770 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_863959 |
|---|
| Protein GI | 117923342 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.579197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC CACGGGATAT GTTTCGCATT GATCCAGACC CAAATATCCA GCGGGTTTTG
GAGGCTGATT CCTATTGGCA AGCGCGGGAA AAAATTTTAG ATACGCTCAT CAAACATACA
CTCATTGATT CCTATAATAA ATTTCGCAAA GCGCGTGAGC CCTATCCTTT TATCAGTCGT
TCTTCATTAC GTCCGGGTTC GGTGGTCTCA TCCAAAGAGT ATAAACTGCA TAACAGCGCC
TTGGTGGTGC TGCTGGCGGA TGTTATGCCC GCTTCTCTGC GCAAGCATTT TCGGTGTCGT
TTGGCCAACC GGGTGATTAA AAAAAATATT GCGGGGGTGG CACCGGATCT ACCGGGGCTA
AACGAGTACG ATACCGCATG GCGGGATGTG CATCATGAGG GTTTTATTAA ACTCATGCGT
ATGATGTTAC CCTTGGATTT TGCTCTGTTG GTGCAGCCCA GTGACGAGGA TGATCGGTAT
CAGTTGACCA ACTTTCACGT CAAAATTGAG CGACTGTTGG ATATGGCGCT GCGCACCATG
GGGCACCATC TTAACTATCT GGAACGGGGC CTCTATGAGC AGGGAGAGAC CTTTATTGAC
CAGTTGGAAC GTAAATTTTT TGAATATTTT AACTACTACC ACAATGCGGC TGGGCGTCGT
GGAGCCAGTG CTTTAGCGGC TCAGGTATTG GCTATGGAGC AGCAGGAAGC CACCATTTTT
AGCACTTCTC AGCAGGATCG GCGGCTGACG TTGTTAACCA CCTACAACGA TAGCCATGAT
CTTAAAATTG AACAGTATGT TTTGCTTTCG TTAGAGCCGG ATGAGTATAA AACACTCAAA
CAGTGGGGTA AGGATGTGGC ATTGGATATC CGTAACCACT ATTTGATCCA TCCACAGAAG
AGCACGCAAC CTGTGGTGGT TATGCGTCTG GTTTATCAAC ACACCGAAGC GGCCCAACCC
AACGCCGATG GAACACTGCG GGAACTTAAT GTGCGAGAGC GTTGGATACG CTTGACAGAG
GAGACCATTA TACCCCTGCA TGGGGGGGCT CAAGCGTTTA TTGGTTATCC GGTAGCTTAT
AAAAAGGATA CCGCTGAGGT GGATGGTAAA TCTTGTCCCT TACCTGTGAA GTAG
|
|---|
| Protein sequence | MTMPRDMFRI DPDPNIQRVL EADSYWQARE KILDTLIKHT LIDSYNKFRK AREPYPFISR
SSLRPGSVVS SKEYKLHNSA LVVLLADVMP ASLRKHFRCR LANRVIKKNI AGVAPDLPGL
NEYDTAWRDV HHEGFIKLMR MMLPLDFALL VQPSDEDDRY QLTNFHVKIE RLLDMALRTM
GHHLNYLERG LYEQGETFID QLERKFFEYF NYYHNAAGRR GASALAAQVL AMEQQEATIF
STSQQDRRLT LLTTYNDSHD LKIEQYVLLS LEPDEYKTLK QWGKDVALDI RNHYLIHPQK
STQPVVVMRL VYQHTEAAQP NADGTLRELN VRERWIRLTE ETIIPLHGGA QAFIGYPVAY
KKDTAEVDGK SCPLPVK
|
|---|
| |