Gene MmarC7_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1720 
Symbol 
ID5329536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1664805 
End bp1665671 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content32% 
IMG OID640794272 
Productaminoacyl-tRNA synthetase, class II 
Protein accessionYP_001330927 
Protein GI150403633 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2247] Putative cell wall-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.980612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.790966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTATT TTAAAATATT TGCTATTTTT TTAGTTTTGA TTATTCCTGC ATCTGCAAGC 
AACGTAGTAC TTGTAAGTGA CACGGTTTCA GACTGCGCAA GTGCAAATAT TATTCCAACG
ATCAATGATT CATACGTCGT TATCAATACG AGCTGGGGTG TTTATGACGA TAATGTGCTT
GAAAAAATAC TAAATGAATA CCCCGAAAAC GTAATTATTG TTGGCGGAAC TGTGGCAGTT
CCTTCTGAAT ATGATACGCA ATTGGAAGAA GAAGGAATAA ACGTTGAAAG AATATATGGA
ATTGATAGAT ACCAGACAAA CAAAAACGTT ATTTTAAAAT TTAAAGATCA AATTCAGAAT
AGAAATATGT GGATAGTTTA TGGGGATGAT GATAGAGCCG AATTTTGTAA TACTGGGCGT
AATATTGTGA TCCTTTCAAA CGGCACTACA CTATCAGTTG ATGATGAGGA TTTAGAAGAT
TTTAACCCCG GAAGAGTTAC CATTATGGAA AATCCATTAT TTAATTCAAA TAATGTACAA
ACTCGACTTC AAAATTATGG ATTTTATGTA AGTACGCAAT CAATGCCGGA AAGTGTGTTG
AATAGAACAA TTTACAGAAA AATGGGCCAA TTACAACTTC AAATTGAAAA TATGGAACAG
CTAGGAATAA ATTGTACCCT GCTTCGAAAT GATTTAAATT CAATAAATAA TTCAATAAAA
AACCAGAACT TAGAACGGGC CTATGTAGGA GAAATAGTTC TTGAAAGAAC TATTTTAAGT
TATAAACACC AAAACCGTCA CTTTTACTGG AACGGACCAA AACTTACATA CAATTCAAAA
AATAATCGTT CTAATTATAA CAACTAA
 
Protein sequence
MNYFKIFAIF LVLIIPASAS NVVLVSDTVS DCASANIIPT INDSYVVINT SWGVYDDNVL 
EKILNEYPEN VIIVGGTVAV PSEYDTQLEE EGINVERIYG IDRYQTNKNV ILKFKDQIQN
RNMWIVYGDD DRAEFCNTGR NIVILSNGTT LSVDDEDLED FNPGRVTIME NPLFNSNNVQ
TRLQNYGFYV STQSMPESVL NRTIYRKMGQ LQLQIENMEQ LGINCTLLRN DLNSINNSIK
NQNLERAYVG EIVLERTILS YKHQNRHFYW NGPKLTYNSK NNRSNYNN