Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1588 |
Symbol | |
ID | 5327903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1544115 |
End bp | 1545713 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640794142 |
Product | S-layer protein |
Protein accession | YP_001330797 |
Protein GI | 150403503 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01564] S-layer protein, MJ0822 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.733203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGAAA GTTTGAAATC GGTTCTAAAA AAAATAGGAT GTATCCTATT TGGAAGTACA CTATTATCTA CGTCCTTTAT GGCAGTTTAT GCCCTCGAAA AATACGGGAA TGTAAATGAC TTTTTAGATG ATGATTTGGT AAAGAACGGA AACCCCGACG TTTATATCGT AGTTGGAGAA AATTCTGCTG CACTGGATGT AACTTCAGCA AATCAAATCT CTGCAAAAAT TGGAACTCTT ACTTACTCTG AAATAGTTAT TGAAGAGGAA TCTACCGTAG AATACCAAAT TATTGGGAAA TCTGAAAGTA TTAATTTACT GGATGGGACT GACAAATTAG ATAGTACCGG TACCGAAAAA TCCTGGATTT TAGTTACTGC AGCCGATGAT AGTTATTCTA ACTATTTTAA CAATGATGAA GGAAATTCTT TTTCATATTC TGGATTTTCA GAAGCAGATC AGACAAAATC GCTTGGAGAA TTTGGATATT TACTTGAATT GGATGATATG GATCCAGAAA ATCATTTTGA ATCTGATGAT GATGCTACAG AAATAATATT TACAAGAATT ATTGATTCAA ACAAAAATGT AAATTCTCAA ACGTTTGATA TTGGAAAAGA CATGGTTTAC GCATCAATAA TTTATCCAAA TCAGGTTTCG GCATTTAAAT TATCAAAAGA ACTAAAAGAA GGTTATGAAA TTCCATTTTT AGGTGACAGA TACCGTATTG TAAAAATTGA TGAAAATGAG GGTATAATCT ACCTTGGAAC CCCTTCATAC GATGGAACTA TTGAACAGAA CGAATACATA AGTTTGGGGG AGTATCAAGT AGTTTTGGGT GAAATTTTAG AAAGCGAAGA TAAATATAGC GTTCAAATTT CAGTATTAAG AAATGGTAAA ATAATTAAAG AACATACTGA GATTTTAAGT TCAGATAAAT CATTTTCATT TATTGCTGGC GGTATTGGAG TTACAGTTCA TGATGTATGG TTAAATAGTG CAGCAGATAC TGGTTATGCA GATATCACGA TATGTAAATC CATACTTGAA TTAGAACTTG GGGAAGAATA CATTGATGAC TGGGAAGTAA GAACTGTTAA CAATAACGGC GGAACTATTG ACTTTTTAAA AACTTATGAA GACAGTGCAG TTGGAATTGC TCTTGTGTAC ACTGGAAGTG ACGTTGAAAG AATAAAGGAT GGGGACAAGC TTGAAATTGC AGATTACGTA AAGTTAGTAT TTGACGATGA AGACGATCTT GATAAAATGA TTGCCCAATA TAAAGCTGAA AGAACAGTAA CTACCGGATC TACTGGTGGA ACCGTCATTA CACAATCCGG AAAAGTTCCG GAAGTGATTC TCGATATTGA AATCGAACTT GATGAAGCGG ATAAAAATTT AATCCTCATT GGTGGCCCTG TTGCAAACAA ACTGACAGAA GAGTTGCAAA ATGATGGAAA AATCAATATT GACAATGAAA GCCCGGCAAC CGCAATATTG GTCGAAGGTG CTGCAAATGG AAACGACGTC CTTGTAGTTG CAGGAGGAGA TAGATACAGT ACAGAAAGTG CAGTACTATC CATCATAAAT CTCATTTAA
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Protein sequence | MGESLKSVLK KIGCILFGST LLSTSFMAVY ALEKYGNVND FLDDDLVKNG NPDVYIVVGE NSAALDVTSA NQISAKIGTL TYSEIVIEEE STVEYQIIGK SESINLLDGT DKLDSTGTEK SWILVTAADD SYSNYFNNDE GNSFSYSGFS EADQTKSLGE FGYLLELDDM DPENHFESDD DATEIIFTRI IDSNKNVNSQ TFDIGKDMVY ASIIYPNQVS AFKLSKELKE GYEIPFLGDR YRIVKIDENE GIIYLGTPSY DGTIEQNEYI SLGEYQVVLG EILESEDKYS VQISVLRNGK IIKEHTEILS SDKSFSFIAG GIGVTVHDVW LNSAADTGYA DITICKSILE LELGEEYIDD WEVRTVNNNG GTIDFLKTYE DSAVGIALVY TGSDVERIKD GDKLEIADYV KLVFDDEDDL DKMIAQYKAE RTVTTGSTGG TVITQSGKVP EVILDIEIEL DEADKNLILI GGPVANKLTE ELQNDGKINI DNESPATAIL VEGAANGNDV LVVAGGDRYS TESAVLSIIN LI
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