Gene MmarC7_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1550 
Symbol 
ID5329270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1513621 
End bp1514298 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content30% 
IMG OID640794104 
ProductDNA polymerase beta subunit 
Protein accessionYP_001330759 
Protein GI150403465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0936126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAATAT GTTGCCAAAA ATTGGTAACT TATATATATC TAAAAATATA CATTTTGGTT 
ATGAACGCTT TAGATAAATT ATATCGGGCT TATTACGCAG CAAATAAAAG TAAATTATAT
TTTAGCGAGT TAAAAGAACT CACTGGACTT TCAAACAGTT CTCTTCAAAA TGCTTTAAGA
AAACTCGAAT CTGAAAAGCA AATTTTAAAA TTAAAAGAAA AATCAAACAC ATATTATATT
TTAAAGAATA CCAAAAAAAC AGTTTTCAAA TTTTCAGAAA TCGATGATGA ACGATTTTGG
AAATTGAATA GGAATGTAAG GGCCCCAATA TTGGATTTTC TCGAAAATTT TCCAAAAGAA
ATCGATTTTA TGATTCTTTT TGGTTCTGCA TCTAGGAAAA AAGAGACAGA AGATAGCGAC
ATAGATTTGA TGGTTATAAC TCATTCATTC GAAGATCCGG ATTTACAAAA AAGGTACAGG
GAAGAGATTA ACCAGAAACT TGAGTATGCA AAATCAAAAG CCGAAAGCAG GGCGATATAT
CCATTAAGTA TAGTTGCAGT TGAACTCAAC TATTTTTTAA CGTCAAAAGA TCATATTGTA
GAGCAGGCCA AATTAACTGG ATTTCCAGTT TTTGGGCATC AGAATTACCA CGAGGTAATT
TTAAATGTTA AACGTTGA
 
Protein sequence
MVICCQKLVT YIYLKIYILV MNALDKLYRA YYAANKSKLY FSELKELTGL SNSSLQNALR 
KLESEKQILK LKEKSNTYYI LKNTKKTVFK FSEIDDERFW KLNRNVRAPI LDFLENFPKE
IDFMILFGSA SRKKETEDSD IDLMVITHSF EDPDLQKRYR EEINQKLEYA KSKAESRAIY
PLSIVAVELN YFLTSKDHIV EQAKLTGFPV FGHQNYHEVI LNVKR