| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1415 |
|---|
| Symbol | |
|---|
| ID | 5329602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1383242 |
|---|
| End bp | 1383958 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640793973 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_001330629 |
|---|
| Protein GI | 150403335 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.242442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGTTA TTCCTGCAGT GGATATGAAA AATAAAAAAT GTGTACAGCT TATTCAGGGA
AACCCTGATA AAAAACACGT TGAATTAGAT AATCCTCCAG AAATTGCAAA AAAATGGGTA
AGCGAGGGTG CAGAAATGCT TCACCTCGTG GATCTCGATG GTGCACTTGA CGGAAAACGG
GTAAACGATG AATTTATCGA AGATATAATT AAAACATCTG GAGTTCCGGT TCAAATCGGC
GGTGGAATTC GATCTATCGA GGATGCAGTA TATTTGATTG AAAAAGGGGC AGAAAAAGTA
ATAATCGGGA CTGTTGCTGT AGAAAACCCT GAAATAATCA GGGAACTCTC GAAAAAAATT
GGCAGTGAAA AAATAATGGT TTCACTCGAT GCAAAAGATG GTAAAGTTGT AATAAAAGGC
TGGAAAGAAA AAACGAAGTA TACTCCGGTA GAAATTGGAA AAATACTCGA AGAAATGGGT
GCAGGAAGTA TTCTATTTAC AAATGTTGAC AGCGAAGGTT TGTTAAATGG AATAAATATT
GAACCAACAA AAGAACTCGT TGATAACCTT AAAATACCTA TTGTGGCATC AGGCGGAGTT
ACTACAATAG ACGACCTTTT AAAATTTAAG AAAATCGGAG TATACGGTGT AGTTGTCGGT
TCTGCAATTT ACAAAAACTT GATAAATTTA AAAGATGCGA TTGAAGCAGT AAAATAA
|
|---|
| Protein sequence | MLVIPAVDMK NKKCVQLIQG NPDKKHVELD NPPEIAKKWV SEGAEMLHLV DLDGALDGKR
VNDEFIEDII KTSGVPVQIG GGIRSIEDAV YLIEKGAEKV IIGTVAVENP EIIRELSKKI
GSEKIMVSLD AKDGKVVIKG WKEKTKYTPV EIGKILEEMG AGSILFTNVD SEGLLNGINI
EPTKELVDNL KIPIVASGGV TTIDDLLKFK KIGVYGVVVG SAIYKNLINL KDAIEAVK
|
|---|
| |