Gene MmarC7_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1415 
Symbol 
ID5329602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1383242 
End bp1383958 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content36% 
IMG OID640793973 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_001330629 
Protein GI150403335 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.242442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTAGTTA TTCCTGCAGT GGATATGAAA AATAAAAAAT GTGTACAGCT TATTCAGGGA 
AACCCTGATA AAAAACACGT TGAATTAGAT AATCCTCCAG AAATTGCAAA AAAATGGGTA
AGCGAGGGTG CAGAAATGCT TCACCTCGTG GATCTCGATG GTGCACTTGA CGGAAAACGG
GTAAACGATG AATTTATCGA AGATATAATT AAAACATCTG GAGTTCCGGT TCAAATCGGC
GGTGGAATTC GATCTATCGA GGATGCAGTA TATTTGATTG AAAAAGGGGC AGAAAAAGTA
ATAATCGGGA CTGTTGCTGT AGAAAACCCT GAAATAATCA GGGAACTCTC GAAAAAAATT
GGCAGTGAAA AAATAATGGT TTCACTCGAT GCAAAAGATG GTAAAGTTGT AATAAAAGGC
TGGAAAGAAA AAACGAAGTA TACTCCGGTA GAAATTGGAA AAATACTCGA AGAAATGGGT
GCAGGAAGTA TTCTATTTAC AAATGTTGAC AGCGAAGGTT TGTTAAATGG AATAAATATT
GAACCAACAA AAGAACTCGT TGATAACCTT AAAATACCTA TTGTGGCATC AGGCGGAGTT
ACTACAATAG ACGACCTTTT AAAATTTAAG AAAATCGGAG TATACGGTGT AGTTGTCGGT
TCTGCAATTT ACAAAAACTT GATAAATTTA AAAGATGCGA TTGAAGCAGT AAAATAA
 
Protein sequence
MLVIPAVDMK NKKCVQLIQG NPDKKHVELD NPPEIAKKWV SEGAEMLHLV DLDGALDGKR 
VNDEFIEDII KTSGVPVQIG GGIRSIEDAV YLIEKGAEKV IIGTVAVENP EIIRELSKKI
GSEKIMVSLD AKDGKVVIKG WKEKTKYTPV EIGKILEEMG AGSILFTNVD SEGLLNGINI
EPTKELVDNL KIPIVASGGV TTIDDLLKFK KIGVYGVVVG SAIYKNLINL KDAIEAVK