Gene MmarC7_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1370 
Symbol 
ID5329504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1332789 
End bp1333319 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content32% 
IMG OID640793926 
Producthypothetical protein 
Protein accessionYP_001330584 
Protein GI150403290 
COG category[R] General function prediction only 
COG ID[COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000927738 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAAAAA TACTCGACGC TTCAGCATTC ATTCACGGAT ACAACCCATC AATTGAAGAA 
GGAGAACATT ACACCACAAA CGGAATCGTT TCAGAAGTCG TTTCAAAAGA AGATATTGTA
AAACTGGCAA TAGAATACGG AAAATTAAAA ATACTTGACC CAAAATCCGA AACTATTGAA
AAAGTAGTCA AAACTTCAAT AGAAACTGGA GACACCATTT CAAACAACGA TATCGAAATA
CTTGCACTTG CAATCGACCT CAACGGAATT TTGTATACTG ACGATTACGG GCTTCAGAAT
GTTTCAAAAA AATTAAAAAT AAAATACGAA AATATCGTTT CAGCAGGTTC AAAAGACGAT
TTCGTCTGGA AAAAAATATG TAAAGGCTGT AAAAAGATGT ATCCTATAAA TTACCTTGAT
GATGAATGCG AAGTATGCGG AAGCCCGCTT TATCGAAAAA TGGTAAAAAA TAGACTTAAA
AAAGGTAAAA AATTTTATGA TAAAAAGAAA AAGCCAGAAA AATTATTTTA A
 
Protein sequence
MIKILDASAF IHGYNPSIEE GEHYTTNGIV SEVVSKEDIV KLAIEYGKLK ILDPKSETIE 
KVVKTSIETG DTISNNDIEI LALAIDLNGI LYTDDYGLQN VSKKLKIKYE NIVSAGSKDD
FVWKKICKGC KKMYPINYLD DECEVCGSPL YRKMVKNRLK KGKKFYDKKK KPEKLF