Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1367 |
Symbol | |
ID | 5329190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 1330719 |
End bp | 1331390 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640793923 |
Product | hypothetical protein |
Protein accession | YP_001330581 |
Protein GI | 150403287 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000869837 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTGTTCTG AGAGTACTTA CTTATATAAA ATACGTGGAA AAAACATGAT TACAGAAAAC ATATTTTTTA TAATGAATAT AATCGGACTT TTAGCGTTTG CAGTAGTTGG CGCATTAAAA GGAATTAAAA AAGGTTTAGA TTTACTTGGA ATAATTGTTC TTGGAATAAT GACTGCACTT GGCGGGGGAA TTACAAGGGA TTTACTTGTA AATACAATTC CTTATGCATT AAGGTCCCCT TATGATATGG GTGTTGCATT GATTGGAGTT TGGAGTGCAA TAATAATTTT TAAAATTTTC AAGGATGATG TAAGCAACAA ATATGTTATA CAGATTCCTG ATGCAATAGG ACTTTCTGCA TTTACAACAA CAGGCGCAAT GATTGCTTAT AACTTTGAAG TATCATTTTT TGGAATAATT ATACTTGCAA CATTAACTGG TGTTGGTGGT GGAATAATAA GCGATATATT GCTACAAAAA ACCCCTTCTG TATTAACCGA AGACTTTTAC GCAAGCTGTT CGATAATTGG TGCAATTGCA TTTTATCTGG CAATTTTATC AAATTTAAGT CTCGAAGCAA GTGCAGTTAT TTGCAGTATC GTTGTTTTAA TGATTAGAAT TGTTGCAATG CTCTGTAAAT GGAGTCTTCC AAAATTTTAT AACGAAAAAT AG
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Protein sequence | MCSESTYLYK IRGKNMITEN IFFIMNIIGL LAFAVVGALK GIKKGLDLLG IIVLGIMTAL GGGITRDLLV NTIPYALRSP YDMGVALIGV WSAIIIFKIF KDDVSNKYVI QIPDAIGLSA FTTTGAMIAY NFEVSFFGII ILATLTGVGG GIISDILLQK TPSVLTEDFY ASCSIIGAIA FYLAILSNLS LEASAVICSI VVLMIRIVAM LCKWSLPKFY NEK
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