| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1284 |
|---|
| Symbol | |
|---|
| ID | 5329608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1249701 |
|---|
| End bp | 1251593 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640793837 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001330498 |
|---|
| Protein GI | 150403204 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1855] ATPase (PilT family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG AAGGGTTTAA TCAAAATTTA AATGAGAATA TGAAGTTTAA GGAATGTAAT
ATCACAGTAG ACACTTGCGT GGTTATTGAT GGGAGGATTA CTGAATTAAT ATCTGACGGA
ACAATCGAAA AATGCACAAT AATAGTTCCA GAAGCAGTAA TTTCAGAATT GGAAGCACAG
GCAAATAAAG GGCGAGAAAT TGGATATTTT GGAATCGAGG AATTAAAAAA GCTTGTCAGT
GTTGCAAAAG AAAAAGATAT CGTAATTGAA TATTATGGGG AAAGGCCCTC AATTGAAGCG
GTTTCACTTG CAAGGGGCGG AGAAATAGAT GCAATAATTA GAAAAGTTGC AAAAGATACA
AATTCAATAC TTTTTACAAG TGATCGGATC CAGTATAATC TGGCAATCGC TCAAAATATC
AATGCACACT TCTTGAAAGT TCATGAGGAA AAGGTAGATT TAAAATTAAT TGAATATTTT
GACGAAATTA CAAGTTCGGT TCACTTAAAA GAGAATTGTT TACCTTATGT TAAAAAAGGA
AGGCCCGGAA AAGTTAAATT AATTCCATTT GCAGATGAAA TAATGAATAG GGCTGAAATA
AAAGTAATAA TTGATAATAT TTTAAAATAT ACTGAGCAAA ATCACGGTTT AATCGAAATT
GAACGAAGGG GTGCAACGGT AATCCAGCTT GGAAATTTGA GGATTTCAAT TGCAAGGCCT
CCTTTTTCAG AAGCTTTAGA GGTTACTGCC GTAAGACCGA TTACAAAAGT GTCTTTGGAG
GATTACAACC TTTCTGAAGA TTTAAAATTG CGATTGAATA CCGCGGAAGG TATTTTTGTT
TCAGGGGCTC CGGGAAGTGG TAAATCCACG TTTGTTTCTG CACTGGCTGA AAGATACAAA
AATATGGATA AAATCGTAAA AACGATGGAA AGTCCAAGAG ATTTGCAAGT TGGAGCTGAA
ATAACTCAGT ATGCGCCACT TGAAGGAAGC ATGGAAAAAA CTTGCGATAT TCTGCTTTTA
GTAAGGCCTG ACTACACGAT ATACGATGAA GTTCGTAAAA CAAAGGATTT TGAGATATTT
GCAGACATGA GGATGGCTGG AGTTGGAATG GTCGGAGTAG TTCACGCTTC AAAAGCAATA
GATTCAATTC AAAGACTTAT TGGAAGAGTT GAACTTGGAA TAATTCCACA AATTGTAGAT
ACCGTAATTT TCATTGAAAA TGGTAAGATT GGAAAAGTTT ACGAAGTGGA ATTTAATGTT
AAAGTACCGC ACGGAATGAA AGAAGCAGAT CTGGCAAGAC CTGTAATTGA AGTAGTCGAC
TTTTTAACGA AATCACCAGA ATACGAAATA TATACTTACG GGGAGCAGGT CGTCGTAATG
CCTATAAAAG AAACAGCAGA GACCAAAAGC CCTGTTTTGG CATACGCAGA AGAAAAAATT
TCAGAAGTTT TGAAAAAACA CCTTCCAAAA AAGTCAAGAC CTGATATCAA AGTCGTAAAC
AACAACACGG TCGAAGTAAA AGTTTTGGAA AAGTTCATTC CTGCAATAAT TGGAAAGGGC
GGAAAAGAAA TCTCAAAACT TGAAGAGATA ACGGGTTTAC GAATAAGTGT CAGGGAAAAG
AGCGAATCTG CAGAACATGA AAAAGAATTC GAAACTTACG AGTTTATAAA CGACTATGAA
AGTACAAAAC TGACCCAAAC GGGAAAACAT GTTATTGTTG AACTTGGCGA GGATTATATC
GGTGCAAATA TCAAGATTTA CATCGAAGGA GAATACGCAT GCTCTGCAAC AGTCAGTTCA
AACGGTACTG TAAATATCAG TAAAAAAACT GCAATCGGAA AGGATTTAGC AAATGCAATG
AAAAAAGGAA AAGATATTTA CGTAGAATTC TAA
|
|---|
| Protein sequence | MSVEGFNQNL NENMKFKECN ITVDTCVVID GRITELISDG TIEKCTIIVP EAVISELEAQ
ANKGREIGYF GIEELKKLVS VAKEKDIVIE YYGERPSIEA VSLARGGEID AIIRKVAKDT
NSILFTSDRI QYNLAIAQNI NAHFLKVHEE KVDLKLIEYF DEITSSVHLK ENCLPYVKKG
RPGKVKLIPF ADEIMNRAEI KVIIDNILKY TEQNHGLIEI ERRGATVIQL GNLRISIARP
PFSEALEVTA VRPITKVSLE DYNLSEDLKL RLNTAEGIFV SGAPGSGKST FVSALAERYK
NMDKIVKTME SPRDLQVGAE ITQYAPLEGS MEKTCDILLL VRPDYTIYDE VRKTKDFEIF
ADMRMAGVGM VGVVHASKAI DSIQRLIGRV ELGIIPQIVD TVIFIENGKI GKVYEVEFNV
KVPHGMKEAD LARPVIEVVD FLTKSPEYEI YTYGEQVVVM PIKETAETKS PVLAYAEEKI
SEVLKKHLPK KSRPDIKVVN NNTVEVKVLE KFIPAIIGKG GKEISKLEEI TGLRISVREK
SESAEHEKEF ETYEFINDYE STKLTQTGKH VIVELGEDYI GANIKIYIEG EYACSATVSS
NGTVNISKKT AIGKDLANAM KKGKDIYVEF
|
|---|
| |