Gene MmarC7_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1200 
Symbol 
ID5329565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1176508 
End bp1177149 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content37% 
IMG OID640793753 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001330414 
Protein GI150403120 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.255062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.76631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAA TTCCTGGAAG CGAGCTTTTA AGCAGCACAC TTCACATAAT TTCACAAAGT 
TTATTATTGC CTGTCGTTGT ATTTTTACTA CTTTTCATGG CGTATGCAGT TATAAATTTC
GGAGAATTCG TGGCAGAATA TTCAAGCAGG ATTAAGGTTA ATTCAAAGGA TCTAAAAAAC
ATGATAAATA CATTCCCTGA TAAAAATGCT CAGGAAATAT CAAGTTCAAT TTCAGACTTA
AGATTGAACA AGGTTCATAT TCAAATTATC AAGGAATTGT GTGAAGAAGG TTGCACTGAC
TTAAAAATGA CCGAATCTCA TGCAAGAAAC CTGATAGAAA AGGAAGAATT GAGACTAGAA
AAAACCCTCG AGAAAACAGA TTTTGTAACG AGGCTTGGAC CAACACTTGG ATTAATGGGA
ACTTTAATTC CAATGGGTCC AGGACTTGCA GCACTTGGTG CAGGAGACAT ACATGCGCTT
GCAAATGCGA TAATTATTGC ATTTGATACA ACAGTTGTAG GTCTTGCTGC AGGGGGAATC
TGTTTCGTTA TTTCAAAGGT TAGACGAAGA TGGTACGAAG AACAGATGTC TACTCTTGAA
GTATTGATGG AATCCGTCTT GGAGGCATTG AAAAAATGTT AA
 
Protein sequence
MVAIPGSELL SSTLHIISQS LLLPVVVFLL LFMAYAVINF GEFVAEYSSR IKVNSKDLKN 
MINTFPDKNA QEISSSISDL RLNKVHIQII KELCEEGCTD LKMTESHARN LIEKEELRLE
KTLEKTDFVT RLGPTLGLMG TLIPMGPGLA ALGAGDIHAL ANAIIIAFDT TVVGLAAGGI
CFVISKVRRR WYEEQMSTLE VLMESVLEAL KKC