Gene MmarC7_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1084 
Symbol 
ID5329319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1055185 
End bp1056231 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content34% 
IMG OID640793631 
Productputative translation factor pelota 
Protein accessionYP_001330301 
Protein GI150403007 
COG category[R] General function prediction only 
COG ID[COG1537] Predicted RNA-binding proteins 
TIGRFAM ID[TIGR00111] probable translation factor pelota 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA TTCAAGAGAT ACCTGAAAAA AATATAATAA AACTAATTCC AGAAAATTTA 
GATGATTTAT GGCATTTATC AAACATAATA CAGCCATATA ATGCAATTTA TGCAGTTACT
GAACGTAGAA CTGAGGATAA AGGGGACAAA CTACGTGCAG ATAGAGGAAC TAAGAGAAAG
GTTTTTTTAG GAATAAAAGC TGAAAAAATT AATTTCCATG AAGATTTCAA TAGACTTCGG
GTAAGCGGAA AAATTATTCA TGCTCCAGAG GACATCCCGA TTGGTTCATA CCACACAATC
GATATTGAAC CTCTTTTACA GGTTTCAGTT CAAAAGAACT GGAAAAAATG GGATCTTGCA
AGATTAAAAG ATGCAGAAGA CTCTTCCAAA AAGCCAAAAG TAGTAGTCGT TATTATGGAT
GATAGCGAAG CGGATATATT TTTAGTTCGT GAATTTGGAA TTAAAGAACT TGCAAGTATT
AAATCGGGCG TTTCTAAAAA ATTAGATTAT AAACAGAACG AACAGGCCAA ATTTAGCTAC
TATTCTGATA TTATCAATTC AATTTCAGAA TTTGAAGGAA AAATACTCTT TGCAGGCCCA
GGATTTGGAA AAAACAATAT TCAAAACTAC ATTTCTGAAA AGCATAAAGA TCTGGCTCCA
AACGTGGTCG TGGAATCCGC AAACCATACT GGAAAATCAG GGCTTTCTGA AATATTGAAA
TCAGGAATTA TCGATAAAAT TTACGGAGAA GCAAGAATCA GCAAGGAAAC ACAAATTATA
GAAAAATTAC TCGAAGAAAT TTCTAAAAAA GGTCTTGCAG CTTACGGAAT TGAAAGTGTA
AACAATGCAA TGAATTACTC TGCAATCGAC ACCCTTTTAC TAACTGATGA ATATTTGAGA
AGAAATAGGC GAACTATCGA AGAATTAATG AACAGTGTTG AAAATATCAA TGGAAGCATA
CTTATCATTT CAACAGAACA CGATGCAGGA AAACAGTTGA AAGCGCTCGG TGGAATTTCG
GCACTGTTGC GGTTTCCAAT AGAATAG
 
Protein sequence
MKIIQEIPEK NIIKLIPENL DDLWHLSNII QPYNAIYAVT ERRTEDKGDK LRADRGTKRK 
VFLGIKAEKI NFHEDFNRLR VSGKIIHAPE DIPIGSYHTI DIEPLLQVSV QKNWKKWDLA
RLKDAEDSSK KPKVVVVIMD DSEADIFLVR EFGIKELASI KSGVSKKLDY KQNEQAKFSY
YSDIINSISE FEGKILFAGP GFGKNNIQNY ISEKHKDLAP NVVVESANHT GKSGLSEILK
SGIIDKIYGE ARISKETQII EKLLEEISKK GLAAYGIESV NNAMNYSAID TLLLTDEYLR
RNRRTIEELM NSVENINGSI LIISTEHDAG KQLKALGGIS ALLRFPIE