| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1035 |
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| Symbol | |
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| ID | 5328873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1010726 |
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| End bp | 1011622 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640793581 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001330253 |
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| Protein GI | 150402959 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.124398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTCA AAAAATACCT GGATCATATA TATCATGTTT TAATTATACG AAATATTAGG
ATATTAAAAA AAACAGGTAA AAAACTCGAT GAACGGGTAT TTATTGGTAT TTTATTAGTT
ATAACAATTT TACCAATATT TTTGAAAATA TTCTTAGGGT TTACCTTAAA AACCACTTTA
ATTTTAACTT TCGTATATTT AGGATCCGTT CTTTCACTAC CTACGATAAT GTATGAATCA
AAAATGGATA AATTTGATCA AAATATACCA AAAGCCCTTT ATGTTATGGT TTTATCGCTT
GATTCTGGAC GTTCCGTTGT TGAAGCAATT AATGAAGTTA TAAGAAGTGG GATTCCTGAA
GTGGATGTTG TATTTTCAAA AGTTGTTGTG TTAATGACTG AAAGAAAATT GAGTTTTGAA
GATGCGATGA TACTCGTTTC AAATTCACTC GATTCAAAGA TATTCAGGCA GGTTGGACGA
TTGATTATTG AAAATAGAAA ATACGGTGGG GAACTTGCTG ACACATTGAA AAAACTTGCT
AAAACTCTTG AAGACCTTCA AAACCTAAAG TCACAACTTT TGAGTGTTAC TGCAAACGGT
CTTGCTGTTG GTCTTATAAT CCTTTGTGGT GTAATTCCTG CAACTGCTGG TTTGATAGGT
GGTTATTTAA CAGTTATATC TCAACTAGCA CCATCTATGC CTTCAGTTGA AGCTTCGCAG
ATATCTAAAG CGATTGAAAC GATTCAGATC GGTTCAGGAT TATTCGGGTT ATTCTTTGCA
GTTCCATTAT TTGGTTTAAA ACTCAACAGG ATGATAATTA CATGTTCTGT CTGTATGACG
TTTGCAATTG CCACGTTTTA TGCAGTTTTA AGACTTACCG GAATGTTATT TGCATAA
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| Protein sequence | MDVKKYLDHI YHVLIIRNIR ILKKTGKKLD ERVFIGILLV ITILPIFLKI FLGFTLKTTL
ILTFVYLGSV LSLPTIMYES KMDKFDQNIP KALYVMVLSL DSGRSVVEAI NEVIRSGIPE
VDVVFSKVVV LMTERKLSFE DAMILVSNSL DSKIFRQVGR LIIENRKYGG ELADTLKKLA
KTLEDLQNLK SQLLSVTANG LAVGLIILCG VIPATAGLIG GYLTVISQLA PSMPSVEASQ
ISKAIETIQI GSGLFGLFFA VPLFGLKLNR MIITCSVCMT FAIATFYAVL RLTGMLFA
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