Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0961 |
Symbol | |
ID | 5329187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 922496 |
End bp | 923497 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640793497 |
Product | H/ACA RNA-protein complex component Cbf5p |
Protein accession | YP_001330179 |
Protein GI | 150402885 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative [TIGR00431] tRNA pseudouridine 55 synthase [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAATTAA TTGTAAAAGA AGAATCAAAA ACGGATTATA ATTACGGATC TGATCCATAC AAAAGAGACA TAAAAACGCT TCTAAATACG GGACTTGTTG TAATCGATAA GCCATCTGGC CCAACTTCCC ACGAAGTTGC CGCATGGGTT AGAAACATGC TAAATTTAGT TAAAGCAGGG CATGGTGGAA CGCTTGACCC AAAAGTTACA GGTGCACTTC CTGTAGCATT AGGAAACACC ACAAAGTGTG TTCCGATCTG GCACATCCCT CCAAAAGAAT ACGTGTGTTT GATGCATCTG CATGACGATG CTAAACTTGA AGATATTGAA AATATTTTCA AAGAATTTAC TGGAAGAATT CATCAAAGAC CCCCTTTAAA AGCTGCTGTC AAAAGAAGCC TTAGAATTAG AAAAATATAC GAAATTGAGA TTTTGGAAAT CGATGGTCGA GATATATTAT TTAGAACAAA ATGCCAGTCC GGAACGTATT TAAGAAAACT TGTAGATGAT ATGGGAGAAG CTCTTGGAAC ATCTGCACAC ATGCAGGAAC TTAGAAGAAC GATTAGTGGG CCATTTTATG AAAATGAAGC CGTTTATTTG CAGGATTTAC TCGATGCATA TATATTCTGG AAAGAAGACG GAAACGAAGA AGAATTAAGA AAATTAGTAA AACCTCTTGA ATACGGGCTA CAACACCTTA AAAAAATAAT TGTAAAGGAT AGCGCAGTCG ATGCAGTATG CCATGGAGCT ACACTTTATT CTTCAGGAGT TTCAAAAATT GAAAAGGGAA TTGGAACTGA TGAAGTTGTT CTGATCGAAA CACTAAAAGG AGAAGCCGTT GCAGTTGGAA AACCACTCAT GAATACAAAA GACATGCTAA AAACCGAAGA AGGCGAAGTT GTAGAAATAA CGCGTGTGAT AATGGAACCT GGGATCTATC CTAGAATCTG GAAAAAAAGA AATAAAAATG ATAAAACTAA AGCGGAATCA AAGAAGAAAT AA
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Protein sequence | MELIVKEESK TDYNYGSDPY KRDIKTLLNT GLVVIDKPSG PTSHEVAAWV RNMLNLVKAG HGGTLDPKVT GALPVALGNT TKCVPIWHIP PKEYVCLMHL HDDAKLEDIE NIFKEFTGRI HQRPPLKAAV KRSLRIRKIY EIEILEIDGR DILFRTKCQS GTYLRKLVDD MGEALGTSAH MQELRRTISG PFYENEAVYL QDLLDAYIFW KEDGNEEELR KLVKPLEYGL QHLKKIIVKD SAVDAVCHGA TLYSSGVSKI EKGIGTDEVV LIETLKGEAV AVGKPLMNTK DMLKTEEGEV VEITRVIMEP GIYPRIWKKR NKNDKTKAES KKK
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