| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0664 |
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| Symbol | rps5p |
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| ID | 5328399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | + |
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| Start bp | 659747 |
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| End bp | 660436 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640793189 |
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| Product | 30S ribosomal protein S5P |
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| Protein accession | YP_001329882 |
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| Protein GI | 150402588 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00751538 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTGAAA AAAAGGCTGA AAAAAGAGCT GAAAAAAGAA AATTCAATAC CGAAGCTTGG
GAACCAAAAA CCCAAATCGG TAGAATGGTT AAGGAAGGAA CAATTTCAGA CATTAACTAC
ATTATGGATA AAGGTCTTCC CTTATTAGAA CCTGAAATTG TTGATGCACT CTTACCCGAT
CTAGAAGAGC AAGTTTTGGA CGTTAAATTG GTTCAAAGAA TGCACAAATC TGGAAGAAGA
GCAAGATACA GAGCAACTGT TGTTGTAGGT AACAAAAACG GATACGTTGG AGTAGGCATG
GGTAAATCAA AAGAAGTTGG CCCTGCTATC AGAAAAGCAA TTGCTCACGC AAAATTATCA
TTAATCAAAG TTAGAATTGG CTGCGGTTCA TGGGAATGCG GTTGCGGATA CCCTCACTCA
ATCCCATTCA CAGCTAAAGG AGCTTGTGGT AGCGTTAAGG TAGAATTACT TCCTGCACCT
AGGGGTGTTG GTTTAGTTGC TGGTAACGTT GCAAAAGCTG TTTTAGGTCT TGCAGGAATA
AAAGATGCAT GGACTAAAAC ATTTGGTGAC ACAAGAACCA CATACAACTT TGCTGAAGCT
ACATTCGATG CATTAAACAA CTTAAACTTC GTAAGATGCT TACCTGCACA AAAGGAAAAA
TTAGGTCTTA CAGAAGGAAG AGTACTCTAA
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| Protein sequence | MAEKKAEKRA EKRKFNTEAW EPKTQIGRMV KEGTISDINY IMDKGLPLLE PEIVDALLPD
LEEQVLDVKL VQRMHKSGRR ARYRATVVVG NKNGYVGVGM GKSKEVGPAI RKAIAHAKLS
LIKVRIGCGS WECGCGYPHS IPFTAKGACG SVKVELLPAP RGVGLVAGNV AKAVLGLAGI
KDAWTKTFGD TRTTYNFAEA TFDALNNLNF VRCLPAQKEK LGLTEGRVL
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