| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0600 |
|---|
| Symbol | |
|---|
| ID | 5328542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 603245 |
|---|
| End bp | 603925 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640793125 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_001329818 |
|---|
| Protein GI | 150402524 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.152008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.590208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATTCAA ATCCATTTGA AACTTATAGA GATATTAGAA TAATGAACGA AAACCCGAAA
TACCTTGTAA AAGGGGACGG AATAGTTCGG GAAAAAATAA AAAGTGAAAA CGTCGAAATC
GGAGAATACA CTTATTATTC GGGATACTAC GAAAGAAAAG AGTTTAAAGA CTGTATAATG
TACCTTGACG AAATCGACAA CAGAAAAGAT GTCGATAAAT TGATTATTGG TAAATTTTGT
AGCATTGCGT CAGGCGTTAA ATTTGTAATG GGTGGAAATC AGGGCCATAG ATACGACTGG
ATTTCAACCT ATCCATTAAC TTTGATTTCT GAAACTCCAG AAGATTTAAA ATCAGAAAAT
GGAAAAGGAT ATTTGAAAAA AGGAGATACA GTAATTGAAA ACGACGTCTG GATTGGTGCA
AATGTAACAA TTATGCCGGG CGTAAAAATT GGCAGCGGTG CAGTAATTGC AACAGGAAGC
GTCGTTACAA AAGAAGTTCC CCCCTATACA ATAGTTGGCG GAAATCCTGC AAAAATAATT
AAAAAAAGAT TTTCTGAAGA AAAAATAGAA CTTCTTTTAA AAATAAAATG GTGGGACTGG
CCAATTGAAA AAATTAAATC AAATATCAAG ATTTTAATGA GCGATGACTT TGAAGAATTA
AAAAAGATTT GTGAAGAATA A
|
|---|
| Protein sequence | MNSNPFETYR DIRIMNENPK YLVKGDGIVR EKIKSENVEI GEYTYYSGYY ERKEFKDCIM
YLDEIDNRKD VDKLIIGKFC SIASGVKFVM GGNQGHRYDW ISTYPLTLIS ETPEDLKSEN
GKGYLKKGDT VIENDVWIGA NVTIMPGVKI GSGAVIATGS VVTKEVPPYT IVGGNPAKII
KKRFSEEKIE LLLKIKWWDW PIEKIKSNIK ILMSDDFEEL KKICEE
|
|---|
| |