| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0566 |
|---|
| Symbol | rps11p |
|---|
| ID | 5328595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 575340 |
|---|
| End bp | 575714 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640793091 |
|---|
| Product | 30S ribosomal protein S11P |
|---|
| Protein accession | YP_001329785 |
|---|
| Protein GI | 150402491 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0100] Ribosomal protein S11 |
|---|
| TIGRFAM ID | [TIGR03628] archaeal ribosomal protein S11P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.549434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA AATGGGGATT AGTACACATT TATGCATCGT ACAACAATAC AATTCTCCAC
GTTACTGATT TAACTGGAGC AGAAACTATC GCTAAAGTTT CAGGCGGTAT GATTGTAAGA
AACCAGAGAG ATGAATCATC TCCATACGCT GCAATGCAAG CTGCATTCAA AATCGCAGAT
TTAATGAGAG ATAAAGGAAT TGATCAGGTA CACGTAAAGG TCAGAGCTAC AGGTGGCCAG
AAATCTAAAA ACCCAGGACC TGGTGCCCAA GCTGCTATCA GAGCATTATC AAGAGCAGGA
ATCAGAATCG GAAGAATTGA AGATGCTACA CCAATTCCAC ACGATGGTAC TACACCAAAA
AGAAAGAACA GATAA
|
|---|
| Protein sequence | MSQKWGLVHI YASYNNTILH VTDLTGAETI AKVSGGMIVR NQRDESSPYA AMQAAFKIAD
LMRDKGIDQV HVKVRATGGQ KSKNPGPGAQ AAIRALSRAG IRIGRIEDAT PIPHDGTTPK
RKNR
|
|---|
| |