Gene MmarC7_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0559 
Symbol 
ID5328616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp566986 
End bp569271 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content37% 
IMG OID640793082 
Productphosphoesterase domain-containing protein 
Protein accessionYP_001329778 
Protein GI150402484 
COG category[L] Replication, recombination and repair 
COG ID[COG1107] Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAA ACTGTAAAAT ATGTGGCGGA ACTGGAAAGA AGGTAGTAAA ATATTCAGAA 
TGTCCGGAAT GCGAAGGAAA AGGTTATTTA GAAGAATTTG AAACAAAAAG TCATTTTAAA
AACGCTTCTA AAAATTCAAA ATATGATTTT GACGATGAAG AAATTCCATG CCCCACATGC
AATGGAACCG GAAAAATTCC GGAATATGAA GATTGCGAGT ACTGCAACGG AACTGGAAAA
GTTGTAAAAT GCGACTCATG CGGTCGTGAA ATTGGAAAAT ATCCTGAAGA TAAAGACTTA
AACACTTGTG AGAACTGTAG TGGTAAGGAA GAAGAACAAA AAGAGAACAA AAAGGTTGTT
TATGTTTTAG ACAACATGTT TACCATGAAC GATCTTGAAG AAGGTAAATT TTACAAGGGA
AAAATTAACC GAACCGAAAA ATACGGAGTA TTCGTTCAGT TGAATGAAAA AACAAGAGGT
CTTTTAAGAT TCAGGGAAGT TGTTGGAAAA AGGCCAAGCG ATTTTAATAT CGGGGACGAA
ATTATTGTCC AGGTATCCGA ATTAAAACTC GAAAAAAGAG AACTTGATTT AAGATACGTT
CCAATTGCAG GATACAAACT CGAAAAACTC GAAAAAGAAC ACGAATTAAT CGATATCAAG
GAAATATTTG ATACGGGATT AATGAACATG AAAGATAAAG TTATTCGAGT TCAAGGAGAA
GTTCTCCAGG CAGCTCAAAC ACCCGGTCCA ACAGTATTTA CTATTACAGA TGGTTCAGAA
GTTGCATGGG TTGCAGCATT TGAATCTGCC GGAGTTAGGA CACACCCTGA TGTAGTAATG
GGTTCAATTA TCGATGTAGT TGGTTCCGTT TCTGTAAGGG ATGGAAAACT TCAGATCGAA
AGAATGAAAC TTGAAAAACT CGAAGGCGAC GCTGAACAAA AAGTAAAAGA TAAAATTGAC
ATTGAACTTG ATAAAAAAGC AGAGCCTGAT AGCGACATCG AATTTTTAGT TGAAAGTGAC
ATTTTGGAAA AATTAAGGCC AAAAATGGCG GATGTTGCAA AAAGAATCAG AAGAGCAGTT
TTAGATGGAA GACCTGTAAT TATAAGACAC CACGCAGATA CGGATGGATA TTGCGGTGGA
ATTGCAATTG AAAAAGCAGT AATCCCTGTT TTGGAGAAAT ATTCAATGGA TTCCGGTGCA
CAATGGCACT ACTTTAGAAG AAGCCCTTCA AAAGCTCCAT TTTATGAATT AGAAGATGTA
ACCAAAGATT TAGTATTTTC AATTGAAGAT TACTTAAGAT TTGGACAGAA AATGCCTTTA
ATTGTTCTTG TAGATAACGG AAGTACTGAT GAAGATATTC CTGCAGTATC CCAAGTTAAA
GCATACGATA TCGAAGTTGT TGTAGTGGAT CACCACTTCC CTGGCGAAGT AATCGATGGA
AAAGTAGAAA TTGATGAATT CGTTGAAGCA CACGTAAATC CTTACCTCGT TGGAGGAGAC
AGCAACCTTA CAGCAGGTGT TTTGGCAACA GAAGTTGCAA GAATGATAAA TCCAGATGTT
ACCGAACTCG TTGAACACTT ACCTGGTATC GCAGTTGTTG GCGACCACGC AAAAGGCGAA
GCTGTAGAGA ACTACATAAA AATAGCACTA GAAAGACTTA CAAAATGCAG TGCTGAGTTT
GGAACTGGAA AAGTATATTC CAGAGAAGAT GTTGAAAAAA TCGGTCAGTG CATGGATTTT
GAAGCATTTT ACTTAAAATT CATGAACGGA ATGGGTATCG TAGAAGACAT CTATGGAATG
AACAAAAAAG ACTTTGCAAG GCATGAAAAA CTTATAAACA TACTTTACGA AAGAGCAATG
GCAATGGTTG ACAGGCAGAT GAAAGCCGTA CGCCCTGCAA TAAAAACAGA AATCTTACCA
AATGGAATTG TATTCAACAC GTTGGATGTT GAAAAATATG CACACAAGTT TACATTCCCT
GCTCCTGGAA AAACCTGTGG ATTTGCACAC GATTCAATAG TTCAACAGTA TGAACCTGGA
ACTCCAGTAA TTACCCTTTC ATATGGCCCT GATTTTGGAG TAGTTCGTGC AACTGATGCA
GTAAGCGAAA AATTCAGCTT CAATTTAAAT CACATCGTGA CACAATTCAT CGATGAAATT
CCTGAAGCAT CGCTTGATGG TGGTGGACAC GAGTGTGCAG GAAGTTTGAA ATTTGTTGAA
GGATTGAGAG AAAAAGTAAT AAATAGATTC TCAGAAGTAG TTTTAGAAAT GAAAGAAAAA
GATTAA
 
Protein sequence
MIENCKICGG TGKKVVKYSE CPECEGKGYL EEFETKSHFK NASKNSKYDF DDEEIPCPTC 
NGTGKIPEYE DCEYCNGTGK VVKCDSCGRE IGKYPEDKDL NTCENCSGKE EEQKENKKVV
YVLDNMFTMN DLEEGKFYKG KINRTEKYGV FVQLNEKTRG LLRFREVVGK RPSDFNIGDE
IIVQVSELKL EKRELDLRYV PIAGYKLEKL EKEHELIDIK EIFDTGLMNM KDKVIRVQGE
VLQAAQTPGP TVFTITDGSE VAWVAAFESA GVRTHPDVVM GSIIDVVGSV SVRDGKLQIE
RMKLEKLEGD AEQKVKDKID IELDKKAEPD SDIEFLVESD ILEKLRPKMA DVAKRIRRAV
LDGRPVIIRH HADTDGYCGG IAIEKAVIPV LEKYSMDSGA QWHYFRRSPS KAPFYELEDV
TKDLVFSIED YLRFGQKMPL IVLVDNGSTD EDIPAVSQVK AYDIEVVVVD HHFPGEVIDG
KVEIDEFVEA HVNPYLVGGD SNLTAGVLAT EVARMINPDV TELVEHLPGI AVVGDHAKGE
AVENYIKIAL ERLTKCSAEF GTGKVYSRED VEKIGQCMDF EAFYLKFMNG MGIVEDIYGM
NKKDFARHEK LINILYERAM AMVDRQMKAV RPAIKTEILP NGIVFNTLDV EKYAHKFTFP
APGKTCGFAH DSIVQQYEPG TPVITLSYGP DFGVVRATDA VSEKFSFNLN HIVTQFIDEI
PEASLDGGGH ECAGSLKFVE GLREKVINRF SEVVLEMKEK D