| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0439 |
|---|
| Symbol | |
|---|
| ID | 5328068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 443667 |
|---|
| End bp | 444782 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640792960 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001329659 |
|---|
| Protein GI | 150402365 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT CAAATTTAAA TGAGAAGGAT ATGGCTTTGG GCTGTAAATA CTGTATAAAA
GGAGAAAAAC TGGTTTTATA TATTACAGGA CTCTGTGAAG AATCCTGCTA TTACTGCCCG
CTTTCAGAAA AAAGAAAAAA AAAGGACGTA ATTTTTGCAA ATGAAAAGCA GATCAATTCA
ATTGAAGAAG CAGTTGAAGA AGCACATCTT TGCGGAAGTA AAGGCGTTGG GATAACTGGT
GGAAACCCGC TTTTAAAAAT TGAAAGAACG GTTGAATATT TAAAAGCTTT GAAGGAAGAA
TTTGGAAATG ATTTCCACGC ACATCTATAC ACCACACCAA AGTTTGTCAG TGAAGAGAAT
TTAACATTAT TGAATGAAGC GGGACTTGAT GAAATCAGAC TGCATTCAAC AAGATTATTC
AATGATTTTG AACATTTTGA TAAATTGGAC TTTTTAAACA AATTAAAACT CTGTAAAGGT
TATATCAAAG ATGTTGGTGT AGAAATTCCG GGAATTCCAA ATTTTGAAAA AGAAATTTTA
GATCTGGCTT TTGACATTGA TAAAATTGGT GTAAAATTCT TAAATATTAA TGAACTTGAA
TATTCTGAAA CAAACTACCA AGCTTTAACG GATAGAGGAT TTTCTGAAAA AGACGATACA
ACTTCAAGAA TTTCTGGAAG CTTTGAAACT GCAAAATATG TTATTGATAA TTTTAAAGGA
AAATTACTAA TTCATTTCTG CCCATCTTCG TTAAAAGACA GCGTTCAAAT GAAAAACCGA
CTAATAAATC GTGCGAGAAA CGTTGCAAAA CCTTACGAAG AAATTACGGA AGAAGGTCTT
TTATTAAAAG GAATTATTAA TTTTAAAAAT TTAACTGATG TTTCAGAAGT AATTGAAATT
CTAAAAGAAA ATGATGTAGA ATTTGAGCTT TTAGAAGATA GATTATTCTT AAATCCCGAA
ATTTTAGAAG ATTTAATCGA TCAATTAAAG GAAAATAACT TTGATTTTAA ATTCAGTGCA
TATATATCGG AATATTACCC TACATCAGAC AAATTTGAAG TCGAAAGAAT TCCCCTTGTT
ATAAAAAAAC CTAATTTAAA ATTAAAGAAA AAATAA
|
|---|
| Protein sequence | MDLSNLNEKD MALGCKYCIK GEKLVLYITG LCEESCYYCP LSEKRKKKDV IFANEKQINS
IEEAVEEAHL CGSKGVGITG GNPLLKIERT VEYLKALKEE FGNDFHAHLY TTPKFVSEEN
LTLLNEAGLD EIRLHSTRLF NDFEHFDKLD FLNKLKLCKG YIKDVGVEIP GIPNFEKEIL
DLAFDIDKIG VKFLNINELE YSETNYQALT DRGFSEKDDT TSRISGSFET AKYVIDNFKG
KLLIHFCPSS LKDSVQMKNR LINRARNVAK PYEEITEEGL LLKGIINFKN LTDVSEVIEI
LKENDVEFEL LEDRLFLNPE ILEDLIDQLK ENNFDFKFSA YISEYYPTSD KFEVERIPLV
IKKPNLKLKK K
|
|---|
| |